Difference between revisions of "L-1-PHOSPHATIDYL-GLYCEROL-P"

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(Created page with "Category:Gene == Gene Tiso_gene_14984 == * left end position: ** 3186 * transcription direction: ** NEGATIVE * right end position: ** 5089 * centisome position: ** 60.0678...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10700 RXN-10700] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_14984 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10700 RXN-10700] ==
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* left end position:
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* direction:
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** 3186
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** acetyl-_c-acetyltransferase
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* right end position:
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** 3-ketoacyl-_thiolase
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** 5089
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** thiolase
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* centisome position:
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* ec number:
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** 60.067875   
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-11524]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-11525]][c] '''+''' 1 [[ACETYL-COA]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 OPC6-3-ketoacyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 OPC4-CoA[c] '''+''' 1 acetyl-CoA[c]
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***ec-number
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17451]]
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** [[pantograph]]-[[creinhardtii]]
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** IN-SILICO_ANNOTATION
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* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
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***EC-NUMBER
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** in-silico_annotation
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** EXPERIMENTAL_ANNOTATION
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***ec-number
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_3855]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[synechocystis]]
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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** EXPERIMENTAL_ANNOTATION
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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***EC-NUMBER
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** in-silico_annotation
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* [[Tiso_gene_3856]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_15327]]
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** [[pantograph]]-[[synechocystis]]
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** EXPERIMENTAL_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_10116]]
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* [[PWY-5076]]
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** IN-SILICO_ANNOTATION
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* [[ILEUSYN-PWY]]
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***EC-NUMBER
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* [[ILEUDEG-PWY]]
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** EXPERIMENTAL_ANNOTATION
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* [[LEU-DEG2-PWY]]
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***EC-NUMBER
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* [[VALDEG-PWY]]
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== Pathways  ==
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* [[PWY-5057]]
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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* [[VALSYN-PWY]]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-7767]]
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== Reconstruction information  ==
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* [[PWY-5108]]
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* Category: [[annotation]]
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* [[LEUSYN-PWY]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-5103]]
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*** Tool: [[pathwaytools]]
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* [[PWY-5101]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5078]]
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*** Tool: [[pathwaytools]]
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* [[ALANINE-VALINESYN-PWY]]
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* [[PWY-5104]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3186}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: right end position=5089}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: centisome position=60.067875    }}
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{{#set: common name=thiolase}}
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{{#set: reaction associated=BRANCHED-CHAINAMINOTRANSFERILEU-RXN|BRANCHED-CHAINAMINOTRANSFERLEU-RXN|BRANCHED-CHAINAMINOTRANSFERVAL-RXN}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: pathway associated=PWY-5076|ILEUSYN-PWY|ILEUDEG-PWY|LEU-DEG2-PWY|VALDEG-PWY|PWY-5057|VALSYN-PWY|PWY-7767|PWY-5108|LEUSYN-PWY|PWY-5103|PWY-5101|PWY-5078|ALANINE-VALINESYN-PWY|PWY-5104}}
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{{#set: gene associated=Tiso_gene_17451|Tiso_gene_3855|Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_10116}}
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{{#set: in pathway=PWY-735}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 01:13, 19 March 2018

Reaction RXN-10700

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
    • thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 OPC6-3-ketoacyl-CoA[c] + 1 coenzyme A[c] => 1 OPC4-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 15 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=L-1-PHOSPHATIDYL-GLYCEROL-P&oldid=29240"