Difference between revisions of "RXN-13720"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDYLGLYCINE-MONOOXYGENASE-RXN PEPTIDYLGLYCINE-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Gene == Gene Tiso_gene_7305 == * left end position: ** 4066 * transcription direction: ** NEGATIVE * right end position: ** 11083 * centisome position: ** 35.8870...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDYLGLYCINE-MONOOXYGENASE-RXN PEPTIDYLGLYCINE-MONOOXYGENASE-RXN] ==
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== Gene Tiso_gene_7305 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4066
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* common name:
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* transcription direction:
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** nhl_repeat_containing_protein
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.14.17.3 EC-1.14.17.3]
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** 11083
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* centisome position:
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** 35.887028   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[FARNESYLTRANSTRANSFERASE-RXN]]
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** 1 [[ASCORBATE]][c] '''+''' 1 [[Peptide-C-terminal-Glycines]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-8528]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 L-ascorbate[c] '''+''' 1 a [protein] C-terminal glycine[c] '''+''' 1 oxygen[c] '''=>''' 1 L-dehydro-ascorbate[c] '''+''' 1 H2O[c] '''+''' 1 a [protein] C-terminal hydroxyglycine[c]
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== Pathways associated ==
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* [[PWY-7736]]
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== Genes associated with this reaction  ==
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* [[PWY-7492]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6659]]
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* [[Tiso_gene_3609]]
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* [[PWY-6691]]
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** IN-SILICO_ANNOTATION
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* [[PWY-5120]]
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***EC-NUMBER
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* [[PWY-7517]]
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== Pathways  ==
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* [[PWY-7721]]
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== Reconstruction information  ==
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* [[PWY-7720]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=4066}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03912 R03912]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=11083}}
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** [http://www.uniprot.org/uniprot/Q9GS29 Q9GS29]
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{{#set: centisome position=35.887028    }}
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** [http://www.uniprot.org/uniprot/O44398 O44398]
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{{#set: reaction associated=FARNESYLTRANSTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q91697 Q91697]
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{{#set: pathway associated=PWY-7736|PWY-7492|PWY-6659|PWY-6691|PWY-5120|PWY-7517|PWY-7721|PWY-7720}}
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** [http://www.uniprot.org/uniprot/P10731 P10731]
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** [http://www.uniprot.org/uniprot/P19021 P19021]
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** [http://www.uniprot.org/uniprot/P14925 P14925]
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** [http://www.uniprot.org/uniprot/P08478 P08478]
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** [http://www.uniprot.org/uniprot/P12890 P12890]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=nhl_repeat_containing_protein}}
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{{#set: ec number=EC-1.14.17.3}}
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{{#set: gene associated=Tiso_gene_3609}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 00:14, 19 March 2018

Gene Tiso_gene_7305

  • left end position:
    • 4066
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 11083
  • centisome position:
    • 35.887028
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13720&oldid=29312"