Difference between revisions of "Cis-cis-D19-37-3-hydroxyC56-2-ACPs"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glucokinase ** hexoki...")
(Created page with "Category:Gene == Gene Tiso_gene_16670 == * left end position: ** 305 * transcription direction: ** NEGATIVE * right end position: ** 2307 * centisome position: ** 7.263634...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] ==
+
== Gene Tiso_gene_16670 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 305
−
* common name:
+
* transcription direction:
−
** glucokinase
+
** NEGATIVE
−
** hexokinase
+
* right end position:
−
* ec number:
+
** 2307
−
** [http://enzyme.expasy.org/EC/2.7.1.1 EC-2.7.1.1]
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/2.7.1.2 EC-2.7.1.2]
+
** 7.263634   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[GLYCEROL-KIN-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[Glucopyranose]][c] '''=>''' 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
+
−
* With common name(s):
+
−
** 1 ATP[c] '''+''' 1 D-glucopyranose[c] '''=>''' 1 D-glucopyranose 6-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_1303]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[synechocystis]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[RIBULOKIN-RXN]]
−
* [[Tiso_gene_3107]]
+
** in-silico_annotation
−
** IN-SILICO_ANNOTATION
+
***automated-name-match
−
***AUTOMATED-NAME-MATCH
+
* [[RXN0-5116]]
−
** EXPERIMENTAL_ANNOTATION
+
** in-silico_annotation
−
***AUTOMATED-NAME-MATCH
+
***automated-name-match
−
== Pathways  ==
+
== Pathways associated ==
−
* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
+
* [[PWY-4261]]
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
* [[ARABCAT-PWY]]
−
* [[TREDEGLOW-PWY]], trehalose degradation I (low osmolarity): [http://metacyc.org/META/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
−
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
+
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY0-1182]], trehalose degradation II (trehalase): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
+
−
** '''11''' reactions found over '''15''' reactions in the full pathway
+
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
+
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
−
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
+
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-2723]], trehalose degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
+
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
−
* [[PWY-2722]], trehalose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2722 PWY-2722]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=305}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17825 17825]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=2307}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01786 R01786]
+
{{#set: centisome position=7.263634    }}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00299 R00299]
+
{{#set: reaction associated=GLYCEROL-KIN-RXN|RIBULOKIN-RXN|RXN0-5116}}
−
* UNIPROT:
+
{{#set: pathway associated=PWY-4261|ARABCAT-PWY}}
−
** [http://www.uniprot.org/uniprot/P0A6V8 P0A6V8]
+
−
** [http://www.uniprot.org/uniprot/P21908 P21908]
+
−
** [http://www.uniprot.org/uniprot/P64254 P64254]
+
−
** [http://www.uniprot.org/uniprot/Q8XDH5 Q8XDH5]
+
−
** [http://www.uniprot.org/uniprot/Q8XDH4 Q8XDH4]
+
−
** [http://www.uniprot.org/uniprot/Q9CE25 Q9CE25]
+
−
** [http://www.uniprot.org/uniprot/P52792 P52792]
+
−
** [http://www.uniprot.org/uniprot/Q9V2Z6 Q9V2Z6]
+
−
** [http://www.uniprot.org/uniprot/Q7M537 Q7M537]
+
−
** [http://www.uniprot.org/uniprot/P17709 P17709]
+
−
** [http://www.uniprot.org/uniprot/Q04409 Q04409]
+
−
** [http://www.uniprot.org/uniprot/Q92407 Q92407]
+
−
** [http://www.uniprot.org/uniprot/O31392 O31392]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=glucokinase}}
+
−
{{#set: common name=hexokinase}}
+
−
{{#set: ec number=EC-2.7.1.1}}
+
−
{{#set: ec number=EC-2.7.1.2}}
+
−
{{#set: gene associated=Tiso_gene_1303|Tiso_gene_3107}}
+
−
{{#set: in pathway=PWY-7238|TREDEGLOW-PWY|PWY-621|PWY-7385|GLYCOCAT-PWY|PWY0-1182|P124-PWY|ANAGLYCOLYSIS-PWY|GLUCOSE1PMETAB-PWY|PWY-5514|PWY-2723|P122-PWY|PWY-2722|PWY-5661}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 00:15, 19 March 2018

Gene Tiso_gene_16670

  • left end position:
    • 305
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2307
  • centisome position:
    • 7.263634
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Cis-cis-D19-37-3-hydroxyC56-2-ACPs&oldid=29391"