Difference between revisions of "Tiso gene 11923"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-DEOXYRIBOSE 2-DEOXYRIBOSE] == * smiles: ** C(O)C(O)C(O)CC=O * inchi key: ** InChIKey=ASJSAQIR...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.39-RXN 2.5.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-DEOXYRIBOSE 2-DEOXYRIBOSE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.39-RXN 2.5.1.39-RXN] ==
−
* smiles:
+
* direction:
−
** C(O)C(O)C(O)CC=O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
* ec number:
−
** InChIKey=ASJSAQIRZKANQN-UHFFFAOYSA-N
+
** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
−
* common name:
+
−
** 2'-deoxyribose
+
−
* molecular weight:
+
−
** 134.132   
+
 
* Synonym(s):
 
* Synonym(s):
−
** deoxyribose
 
−
** 2-deoxyribose
 
−
** 2-deoxy-D-ribose
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
== Reaction(s) of unknown directionality ==
+
** 1 [[SOLANESYL-PYROPHOSPHATE]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[NONAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c]
−
* [[RXN-14223]]
+
* With common name(s):
 +
** 1 all-trans-nonaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 3-nonaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_11582]]
 +
** [[pantograph]]-[[synechocystis]]
 +
== Pathways  ==
 +
* [[PWY-5871]], ubiquinol-9 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5871 PWY-5871]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5856]], ubiquinol-9 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5856 PWY-5856]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6978]], plastoquinol-9 biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6978 PWY-6978]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* CAS : 533-67-5
+
* RHEA:
−
* PUBCHEM:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17709 17709]
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=10786 10786]
+
* LIGAND-RXN:
−
* HMDB : HMDB03224
+
** [http://www.genome.jp/dbget-bin/www_bget?R07273 R07273]
−
* LIGAND-CPD:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C01801 C01801]
+
{{#set: ec number=EC-2.5.1.39}}
−
* CHEMSPIDER:
+
{{#set: gene associated=Tiso_gene_11582}}
−
** [http://www.chemspider.com/Chemical-Structure.10330.html 10330]
+
{{#set: in pathway=PWY-5871|PWY-5856|PWY-6978}}
−
* CHEBI:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=131350 131350]
+
{{#set: reconstruction source=orthology-synechocystis}}
−
* METABOLIGHTS : MTBLC28816
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: smiles=C(O)C(O)C(O)CC=O}}
+
−
{{#set: inchi key=InChIKey=ASJSAQIRZKANQN-UHFFFAOYSA-N}}
+
−
{{#set: common name=2'-deoxyribose}}
+
−
{{#set: molecular weight=134.132    }}
+
−
{{#set: common name=deoxyribose|2-deoxyribose|2-deoxy-D-ribose}}
+
−
{{#set: consumed or produced by=RXN-14223}}
+

Revision as of 00:15, 19 March 2018

Reaction 2.5.1.39-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5871, ubiquinol-9 biosynthesis (eukaryotic): PWY-5871
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-5856, ubiquinol-9 biosynthesis (prokaryotic): PWY-5856
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6978, plastoquinol-9 biosynthesis II: PWY-6978
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11923&oldid=29440"