Difference between revisions of "Tiso gene 15256"

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(Created page with "Category:Gene == Gene Tiso_gene_11016 == * left end position: ** 2656 * transcription direction: ** POSITIVE * right end position: ** 5075 * centisome position: ** 32.6892...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7644 RXN-7644] == * direction: ** REVERSIBLE * common name: ** D-sorbitol 2-dehydrogenase ** po...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_11016 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7644 RXN-7644] ==
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* left end position:
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* direction:
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** 2656
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** D-sorbitol 2-dehydrogenase
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* right end position:
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** polyketide_synthase
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** 5075
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** l-iditol_2-dehydrogenase
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* centisome position:
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* ec number:
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** 32.68923   
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** [http://enzyme.expasy.org/EC/1.1.1.14 EC-1.1.1.14]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.1.1.145-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[SORBITOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15382]][c] '''+''' 1 [[NADH]][c]
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***ec-number
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* With common name(s):
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* [[DIHYDROKAEMPFEROL-4-REDUCTASE-RXN]]
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** 1 D-sorbitol[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 keto-D-fructose[c] '''+''' 1 NADH[c]
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** [[pantograph]]-[[athaliana]]
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* [[PEROXID-RXN]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_5424]]
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* [[RXN-1101]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[athaliana]]
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***EC-NUMBER
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* [[RXN-1106]]
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* [[Tiso_gene_6562]]
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** [[pantograph]]-[[athaliana]]
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** IN-SILICO_ANNOTATION
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* [[RXN-1124]]
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_18533]]
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* [[RXN-12693]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***AUTOMATED-NAME-MATCH
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***ec-number
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* [[Tiso_gene_15088]]
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* [[RXN-12747]]
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** [[pantograph]]-[[esiliculosus]]
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** in-silico_annotation
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* [[Tiso_gene_6563]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN-12789]]
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***EC-NUMBER
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** in-silico_annotation
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* [[Tiso_gene_5425]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN-14240]]
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***EC-NUMBER
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** in-silico_annotation
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== Pathways ==
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***ec-number
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* [[PWY-4101]], D-sorbitol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101]
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* [[RXN-15288]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** in-silico_annotation
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== Reconstruction information  ==
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***ec-number
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* Category: [[orthology]]
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* [[RXN-17352]]
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** Source: [[orthology-esiliculosus]]
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** in-silico_annotation
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*** Tool: [[pantograph]]
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***ec-number
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* Category: [[annotation]]
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* [[RXN-600]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[athaliana]]
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*** Tool: [[pathwaytools]]
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* [[RXN-7784]]
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** [[pantograph]]-[[athaliana]]
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* [[RXN-8635]]
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** in-silico_annotation
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***ec-number
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* [[RXN-9725]]
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** [[pantograph]]-[[athaliana]]
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* [[RXN66-342]]
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** in-silico_annotation
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***ec-number
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* [[RXN66-350]]
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** in-silico_annotation
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***ec-number
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* [[RXN66-353]]
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** in-silico_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-7299]]
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* [[PWY-7214]]
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* [[PWY-6824]]
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* [[PWY-5152]]
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* [[PWY-5461]]
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* [[PWY66-378]]
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* [[PWY-7445]]
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* [[PWY-6946]]
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* [[PWY-5469]]
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* [[PWY-6944]]
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* [[PWY-5466]]
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* [[PWY-6027]]
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* [[PWY-361]]
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* [[PWY-6948]]
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* [[PWY1F-823]]
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* [[PWY-6035]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=2656}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33031 33031]
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{{#set: right end position=5075}}
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* LIGAND-RXN:
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{{#set: centisome position=32.68923    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00875 R00875]
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{{#set: reaction associated=1.1.1.145-RXN|DIHYDROKAEMPFEROL-4-REDUCTASE-RXN|PEROXID-RXN|RXN-1101|RXN-1106|RXN-1124|RXN-12693|RXN-12747|RXN-12789|RXN-14240|RXN-15288|RXN-17352|RXN-600|RXN-7784|RXN-8635|RXN-9725|RXN66-342|RXN66-350|RXN66-353}}
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{{#set: direction=REVERSIBLE}}
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{{#set: pathway associated=PWY-7299|PWY-7214|PWY-6824|PWY-5152|PWY-5461|PWY66-378|PWY-7445|PWY-6946|PWY-5469|PWY-6944|PWY-5466|PWY-6027|PWY-361|PWY-6948|PWY1F-823|PWY-6035}}
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{{#set: common name=D-sorbitol 2-dehydrogenase}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=l-iditol_2-dehydrogenase}}
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{{#set: ec number=EC-1.1.1.14}}
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{{#set: gene associated=Tiso_gene_5424|Tiso_gene_6562|Tiso_gene_18533|Tiso_gene_15088|Tiso_gene_6563|Tiso_gene_5425}}
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{{#set: in pathway=PWY-4101}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 00:16, 19 March 2018

Reaction RXN-7644

  • direction:
    • REVERSIBLE
  • common name:
    • D-sorbitol 2-dehydrogenase
    • polyketide_synthase
    • l-iditol_2-dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-sorbitol[c] + 1 NAD+[c] <=> 1 H+[c] + 1 keto-D-fructose[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4101, D-sorbitol degradation I: PWY-4101
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15256&oldid=29499"