Difference between revisions of "CPD-1107"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AAL_fum AAL_fum] == * direction: ** LEFT-TO-RIGHT * common name: ** N6-(1,2-dicarboxyethyl)AMP AMP-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AAL_fum AAL_fum] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming)
+
** [http://enzyme.expasy.org/EC/3.1.3.46 EC-3.1.3.46]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ADENYLOSUCC]][c] '''=>''' 1.0 [[FUM]][c] '''+''' 1.0 [[AMP]][c]
+
** 1 [[CPD-535]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 adenylo-succinate[c] '''=>''' 1.0 fumarate[c] '''+''' 1.0 AMP[c]
+
** 1 β-D-fructose 2,6-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 β-D-fructofuranose 6-phosphate[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6720]]
+
* [[Tiso_gene_15398]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 
** [[pantograph]]-[[creinhardtii]]
 
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_892]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_893]]
 +
** [[pantograph]]-[[athaliana]]
 +
* [[Tiso_gene_2100]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[athaliana]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY66-423]], fructose 2,6-bisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-423 PWY66-423]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17289 17289]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00763 R00763]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P26285 P26285]
 +
** [http://www.uniprot.org/uniprot/P25114 P25114]
 +
** [http://www.uniprot.org/uniprot/Q7M3I3 Q7M3I3]
 +
** [http://www.uniprot.org/uniprot/P49872 P49872]
 +
** [http://www.uniprot.org/uniprot/Q28830 Q28830]
 +
** [http://www.uniprot.org/uniprot/Q91348 Q91348]
 +
** [http://www.uniprot.org/uniprot/Q9JJH5 Q9JJH5]
 +
** [http://www.uniprot.org/uniprot/Q16875 Q16875]
 +
** [http://www.uniprot.org/uniprot/P07953 P07953]
 +
** [http://www.uniprot.org/uniprot/P16118 P16118]
 +
** [http://www.uniprot.org/uniprot/P32604 P32604]
 +
** [http://www.uniprot.org/uniprot/P70265 P70265]
 +
** [http://www.uniprot.org/uniprot/P70266 P70266]
 +
** [http://www.uniprot.org/uniprot/O24559 O24559]
 +
** [http://www.uniprot.org/uniprot/O81398 O81398]
 +
** [http://www.uniprot.org/uniprot/O64983 O64983]
 +
** [http://www.uniprot.org/uniprot/Q9URZ7 Q9URZ7]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming)}}
+
{{#set: ec number=EC-3.1.3.46}}
−
{{#set: gene associated=Tiso_gene_6720}}
+
{{#set: gene associated=Tiso_gene_15398|Tiso_gene_892|Tiso_gene_893|Tiso_gene_2100}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY66-423}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-experimental_annotation|annotation-in-silico_annotation}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:16, 19 March 2018

Reaction 3.1.3.46-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 β-D-fructose 2,6-bisphosphate[c] + 1 H2O[c] => 1 β-D-fructofuranose 6-phosphate[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-423, fructose 2,6-bisphosphate biosynthesis: PWY66-423
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-1107&oldid=29547"