Difference between revisions of "NDPK"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11502 RXN-11502] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-galactosidase * ec nu...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARPT ARPT] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP:riboflavin 5'-phosphotransferase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11502 RXN-11502] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARPT ARPT] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** alpha-galactosidase
+
** ATP:riboflavin 5'-phosphotransferase
* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1 EC-3.2.1]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD-1099]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SUCROSE]][c] '''+''' 1 [[ALPHA-D-GALACTOSE]][c]
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** 1.0 [[RIBOFLAVIN]][c] '''+''' 1.0 [[ATP]][c] '''=>''' 1.0 [[PROTON]][c] '''+''' 1.0 [[ADP]][c] '''+''' 1.0 [[FMN]][c]
 
* With common name(s):
 
* With common name(s):
** 1 raffinose[c] '''+''' 1 H2O[c] '''=>''' 1 sucrose[c] '''+''' 1 α-D-galactose[c]
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** 1.0 riboflavin[c] '''+''' 1.0 ATP[c] '''=>''' 1.0 H+[c] '''+''' 1.0 ADP[c] '''+''' 1.0 FMN[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_8673]]
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* [[Tiso_gene_7479]]
 
** [[pantograph]]-[[creinhardtii]]
 
** [[pantograph]]-[[creinhardtii]]
* [[Tiso_gene_4615]]
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
** [[pantograph]]-[[creinhardtii]]
 
* [[Tiso_gene_16101]]
 
** [[pantograph]]-[[creinhardtii]]
 
* [[Tiso_gene_3392]]
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
** [[pantograph]]-[[athaliana]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
 
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[orthology]]
** [[pantograph]]:
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** Source: [[orthology-creinhardtii]]
*** [[creinhardtii]]
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*** Tool: [[pantograph]]
*** [[athaliana]]
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* [[annotation]]:
+
** [[pathwaytools]]:
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*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01103 R01103]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=alpha-galactosidase}}
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{{#set: common name=ATP:riboflavin 5'-phosphotransferase}}
{{#set: ec number=EC-3.2.1}}
+
{{#set: gene associated=Tiso_gene_7479}}
{{#set: gene associated=Tiso_gene_8673|Tiso_gene_4615|Tiso_gene_16101|Tiso_gene_3392}}
+
{{#set: in pathway=}}
{{#set: in pathway=PWY-6527}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=creinhardtii|athaliana}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 

Revision as of 00:17, 19 March 2018

Reaction ARPT

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ATP:riboflavin 5'-phosphotransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 riboflavin[c] + 1.0 ATP[c] => 1.0 H+[c] + 1.0 ADP[c] + 1.0 FMN[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links