Difference between revisions of "Apo-Transcarboxylases"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_19573 == * left end position: ** 779 * transcription direction: ** POSITIVE * right end position: ** 2214 * centisome position: ** 35.15343...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOLEUCINE--TRNA-LIGASE-RXN ISOLEUCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOLEUCINE--TRNA-LIGASE-RXN ISOLEUCINE--TRNA-LIGASE-RXN] == |
− | * | + | * direction: |
− | ** | + | ** LEFT-TO-RIGHT |
− | * | + | * common name: |
− | ** | + | ** isoleucine--trna_cytoplasmic |
− | + | ** isoleucine--trna_ligase | |
− | ** | + | * ec number: |
− | * | + | ** [http://enzyme.expasy.org/EC/6.1.1.5 EC-6.1.1.5] |
− | ** | + | |
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** | + | ** 1 [[ILE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ILE-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-ILE-tRNAs]][c] '''+''' 1 [[AMP]][c] |
− | *** | + | * With common name(s): |
+ | ** 1 L-isoleucine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAile[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-isoleucyl-[tRNAile][c] '''+''' 1 AMP[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_12496]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_11779]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
** [[pantograph]]-[[esiliculosus]] | ** [[pantograph]]-[[esiliculosus]] | ||
− | == Pathways | + | == Pathways == |
− | * [[TRNA-CHARGING-PWY]] | + | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] |
+ | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11060 11060] |
− | {{#set: | + | * LIGAND-RXN: |
− | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03656 R03656] |
− | {{#set: | + | * UNIPROT: |
− | {{#set: pathway | + | ** [http://www.uniprot.org/uniprot/P18330 P18330] |
+ | ** [http://www.uniprot.org/uniprot/P36422 P36422] | ||
+ | ** [http://www.uniprot.org/uniprot/O29622 O29622] | ||
+ | ** [http://www.uniprot.org/uniprot/P47587 P47587] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZCU4 Q9ZCU4] | ||
+ | ** [http://www.uniprot.org/uniprot/P46213 P46213] | ||
+ | ** [http://www.uniprot.org/uniprot/P41257 P41257] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JVY4 Q9JVY4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58357 Q58357] | ||
+ | ** [http://www.uniprot.org/uniprot/O83466 O83466] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z972 Q9Z972] | ||
+ | ** [http://www.uniprot.org/uniprot/P56456 P56456] | ||
+ | ** [http://www.uniprot.org/uniprot/O58792 O58792] | ||
+ | ** [http://www.uniprot.org/uniprot/O84022 O84022] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZJJ1 Q9ZJJ1] | ||
+ | ** [http://www.uniprot.org/uniprot/O66651 O66651] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEH8 Q9CEH8] | ||
+ | ** [http://www.uniprot.org/uniprot/O27428 O27428] | ||
+ | ** [http://www.uniprot.org/uniprot/Q45477 Q45477] | ||
+ | ** [http://www.uniprot.org/uniprot/O51773 O51773] | ||
+ | ** [http://www.uniprot.org/uniprot/P46207 P46207] | ||
+ | ** [http://www.uniprot.org/uniprot/P41252 P41252] | ||
+ | ** [http://www.uniprot.org/uniprot/P41972 P41972] | ||
+ | ** [http://www.uniprot.org/uniprot/P48526 P48526] | ||
+ | ** [http://www.uniprot.org/uniprot/P75258 P75258] | ||
+ | ** [http://www.uniprot.org/uniprot/P73505 P73505] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49024 Q49024] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49074 Q49074] | ||
+ | ** [http://www.uniprot.org/uniprot/P43824 P43824] | ||
+ | ** [http://www.uniprot.org/uniprot/P09436 P09436] | ||
+ | ** [http://www.uniprot.org/uniprot/P00956 P00956] | ||
+ | ** [http://www.uniprot.org/uniprot/Q94425 Q94425] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=isoleucine--trna_cytoplasmic}} | ||
+ | {{#set: common name=isoleucine--trna_ligase}} | ||
+ | {{#set: ec number=EC-6.1.1.5}} | ||
+ | {{#set: gene associated=Tiso_gene_12496|Tiso_gene_11779}} | ||
+ | {{#set: in pathway=TRNA-CHARGING-PWY}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 00:17, 19 March 2018
Contents
Reaction ISOLEUCINE--TRNA-LIGASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- isoleucine--trna_cytoplasmic
- isoleucine--trna_ligase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 L-isoleucine[c] + 1 ATP[c] + 1 a tRNAile[c] => 1 diphosphate[c] + 1 an L-isoleucyl-[tRNAile][c] + 1 AMP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_12496
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
- Tiso_gene_11779
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
Pathways
- TRNA-CHARGING-PWY, tRNA charging: TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: