Difference between revisions of "3.5.2.17-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.2.31-RXN 2.4.2.31-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** vacuolar_protein_...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11784 RXN-11784] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.2.31-RXN 2.4.2.31-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11784 RXN-11784] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** ORF
+
−
** vacuolar_protein_8
+
−
** ankyrin_repeat_domain_protein
+
−
** sir2-family_protein_hdac1
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.2.31 EC-2.4.2.31]
+
** [http://enzyme.expasy.org/EC/1.4.3.21 EC-1.4.3.21]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Protein-L-Arginines]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-557]][c] '''+''' 1 [[NIACINAMIDE]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CADAVERINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12763]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [protein]-L-arginine[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 a protein-N&omega;-(ADP-D-ribosyl)-L-arginine[c] '''+''' 1 nicotinamide[c]
+
** 1 oxygen[c] '''+''' 1 cadaverine[c] '''+''' 1 H2O[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 5-aminopentanal[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16690]]
+
* [[Tiso_gene_8756]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[athaliana]]
−
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_5361]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18844]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_16539]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17880]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_19256]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_16775]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1521]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17938]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14179]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_19047]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_16538]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13548]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18843]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1416]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_8768]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00555 R00555]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06740 R06740]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/Q03515 Q03515]
+
{{#set: ec number=EC-1.4.3.21}}
−
** [http://www.uniprot.org/uniprot/P55806 P55806]
+
{{#set: gene associated=Tiso_gene_8756}}
−
** [http://www.uniprot.org/uniprot/P52961 P52961]
+
−
** [http://www.uniprot.org/uniprot/P55807 P55807]
+
−
** [http://www.uniprot.org/uniprot/Q92080 Q92080]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=vacuolar_protein_8}}
+
−
{{#set: common name=ankyrin_repeat_domain_protein}}
+
−
{{#set: common name=sir2-family_protein_hdac1}}
+
−
{{#set: ec number=EC-2.4.2.31}}
+
−
{{#set: gene associated=Tiso_gene_16690|Tiso_gene_5361|Tiso_gene_18844|Tiso_gene_16539|Tiso_gene_17880|Tiso_gene_19256|Tiso_gene_16775|Tiso_gene_1521|Tiso_gene_17938|Tiso_gene_14179|Tiso_gene_19047|Tiso_gene_16538|Tiso_gene_13548|Tiso_gene_18843|Tiso_gene_1416|Tiso_gene_8768}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph}}

Revision as of 00:18, 19 March 2018

Reaction RXN-11784

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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