Difference between revisions of "MediaWiki:Sidebar"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.52-RXN 3.2.1.52-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-hexosaminidase *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.2.17-RXN 3.5.2.17-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5-hydroxyisourate_hyd...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.52-RXN 3.2.1.52-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.2.17-RXN 3.5.2.17-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** beta-hexosaminidase
+
** 5-hydroxyisourate_hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.52 EC-3.2.1.52]
+
** [http://enzyme.expasy.org/EC/3.5.2.17 EC-3.5.2.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[N-Acetyl-beta-D-Hexosaminides]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 1 [[N-acetyl-beta-D-hexosamines]][c]
+
** 1 [[5-HYDROXYISOURATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-5821]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 an N-acetyl-β-D-hexosaminide[c] '''=>''' 1 an alcohol[c] '''+''' 1 an N-acetyl-β-D-hexosamine[c]
+
** 1 5-hydroxyisourate[c] '''+''' 1 H2O[c] '''=>''' 1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14122]]
+
* [[Tiso_gene_13181]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_1129]]
+
** [[pantograph]]-[[creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7394]], urate degradation to allantoin II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7394 PWY-7394]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5691]], urate degradation to allantoin I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5691 PWY-5691]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P13723 P13723]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23736 23736]
−
** [http://www.uniprot.org/uniprot/P07686 P07686]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/Q04786 Q04786]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06601 R06601]
−
** [http://www.uniprot.org/uniprot/P06865 P06865]
+
−
** [http://www.uniprot.org/uniprot/P20060 P20060]
+
−
** [http://www.uniprot.org/uniprot/Q9CFI2 Q9CFI2]
+
−
** [http://www.uniprot.org/uniprot/Q9JVT3 Q9JVT3]
+
−
** [http://www.uniprot.org/uniprot/P29416 P29416]
+
−
** [http://www.uniprot.org/uniprot/Q54468 Q54468]
+
−
** [http://www.uniprot.org/uniprot/P39848 P39848]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=beta-hexosaminidase}}
+
{{#set: common name=5-hydroxyisourate_hydrolase}}
−
{{#set: ec number=EC-3.2.1.52}}
+
{{#set: ec number=EC-3.5.2.17}}
−
{{#set: gene associated=Tiso_gene_14122|Tiso_gene_1129}}
+
{{#set: gene associated=Tiso_gene_13181}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-7394|PWY-5691}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 00:18, 19 March 2018

Reaction 3.5.2.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5-hydroxyisourate_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-hydroxyisourate[c] + 1 H2O[c] => 1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7394, urate degradation to allantoin II: PWY-7394
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5691, urate degradation to allantoin I: PWY-5691
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=MediaWiki:Sidebar&oldid=29677"