Difference between revisions of "Category:Gene"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-982 RXN-982] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.20...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UTPHEXPURIDYLYLTRANS-RXN UTPHEXPURIDYLYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: **...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-982 RXN-982] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UTPHEXPURIDYLYLTRANS-RXN UTPHEXPURIDYLYLTRANS-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** dp-n-acetylglucosamine_pyrophosphorylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.20.4.1 EC-1.20.4.1]
+
** [http://enzyme.expasy.org/EC/2.7.7.64 EC-2.7.7.64]
 +
** [http://enzyme.expasy.org/EC/2.7.7.10 EC-2.7.7.10]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ARSENATE]][c] '''+''' 1 [[Red-Glutaredoxins]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-763]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-Glutaredoxins]][c]
+
** 1 [[GALACTOSE-1P]][c] '''+''' 1 [[UTP]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CPD-14553]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 arsenate[c] '''+''' 1 a reduced glutaredoxin[c] '''+''' 1 H+[c] '''=>''' 1 arsenite[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized glutaredoxin[c]
+
** 1 &alpha;-D-galactose 1-phosphate[c] '''+''' 1 UTP[c] '''+''' 1 H+[c] '''<=>''' 1 UDP-&alpha;-D-galactose[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9683]]
+
* [[Tiso_gene_9110]]
−
** [[pantograph]]-[[esiliculosus]]
+
** EXPERIMENTAL_ANNOTATION
−
* [[Tiso_gene_6764]]
+
***AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
* [[Tiso_gene_6457]]
−
* [[Tiso_gene_7378]]
+
** IN-SILICO_ANNOTATION
−
** [[pantograph]]-[[esiliculosus]]
+
***EC-NUMBER
−
* [[Tiso_gene_1559]]
+
* [[Tiso_gene_6459]]
−
** [[pantograph]]-[[esiliculosus]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14796]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_17566]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_6458]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-4621]], arsenate detoxification II (glutaredoxin): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4621 PWY-4621]
+
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-4202]], arsenate detoxification I (glutaredoxin): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4202 PWY-4202]
+
* [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14209 14209]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05747 R05747]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00502 R00502]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: ec number=EC-1.20.4.1}}
+
** [http://www.uniprot.org/uniprot/P22714 P22714]
−
{{#set: gene associated=Tiso_gene_9683|Tiso_gene_6764|Tiso_gene_7378|Tiso_gene_1559}}
+
** [http://www.uniprot.org/uniprot/P96994 P96994]
−
{{#set: in pathway=PWY-4621|PWY-4202}}
+
** [http://www.uniprot.org/uniprot/P39575 P39575]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/P40908 P40908]
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: common name=dp-n-acetylglucosamine_pyrophosphorylase}}
 +
{{#set: ec number=EC-2.7.7.64}}
 +
{{#set: ec number=EC-2.7.7.10}}
 +
{{#set: gene associated=Tiso_gene_9110|Tiso_gene_6457|Tiso_gene_6459|Tiso_gene_14796|Tiso_gene_17566|Tiso_gene_6458}}
 +
{{#set: in pathway=PWY-6527|PWY-3821}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 00:18, 19 March 2018

Reaction UTPHEXPURIDYLYLTRANS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • dp-n-acetylglucosamine_pyrophosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-galactose 1-phosphate[c] + 1 UTP[c] + 1 H+[c] <=> 1 UDP-α-D-galactose[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6527, stachyose degradation: PWY-6527
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-3821, D-galactose degradation III: PWY-3821
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Pages in category "Gene"

The following 200 pages are in this category, out of 2,723 total.

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