Difference between revisions of "Workflow"

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(Created page with "{{#ask: Category:Reaction reconstruction category::annotation | ?common name | ?ec number | ?reconstruction category | ?reconstruction tool | ?reconstruction source |...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONDEHYDROG-RXN 6PGLUCONDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosp...")
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{{#ask: [[Category:Reaction]] [[reconstruction category::annotation]]
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[[Category:Reaction]]
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| ?common name
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONDEHYDROG-RXN 6PGLUCONDEHYDROG-RXN] ==
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| ?ec number
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* direction:
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| ?reconstruction category
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** LEFT-TO-RIGHT
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| ?reconstruction tool
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* common name:
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| ?reconstruction source
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** phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]
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| ?gene associated
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* ec number:
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| ?in pathway
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** [http://enzyme.expasy.org/EC/1.1.1.351 EC-1.1.1.351]
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}}
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* Synonym(s):
 +
** 6PGD
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** 6-phosphogluconic carboxylase
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** 6-phosphogluconic dehydrogenase
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** Phosphogluconic acid dehydrogenase
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== Reaction Formula ==
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* With identifiers:
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** 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-2961]][c] '''=>''' 1 [[RIBULOSE-5P]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* With common name(s):
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** 1 NAD(P)+[c] '''+''' 1 D-gluconate 6-phosphate[c] '''=>''' 1 D-ribulose 5-phosphate[c] '''+''' 1 NAD(P)H[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_91]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_20238]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_7157]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''14''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P14332 P14332]
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** [http://www.uniprot.org/uniprot/P31072 P31072]
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** [http://www.uniprot.org/uniprot/Q9CDN4 Q9CDN4]
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** [http://www.uniprot.org/uniprot/P47506 P47506]
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** [http://www.uniprot.org/uniprot/Q9JWS3 Q9JWS3]
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** [http://www.uniprot.org/uniprot/P43774 P43774]
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** [http://www.uniprot.org/uniprot/P12013 P12013]
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** [http://www.uniprot.org/uniprot/P41576 P41576]
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** [http://www.uniprot.org/uniprot/P00350 P00350]
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** [http://www.uniprot.org/uniprot/P00349 P00349]
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** [http://www.uniprot.org/uniprot/P52209 P52209]
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** [http://www.uniprot.org/uniprot/P41581 P41581]
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** [http://www.uniprot.org/uniprot/P41582 P41582]
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** [http://www.uniprot.org/uniprot/Q59275 Q59275]
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** [http://www.uniprot.org/uniprot/P41583 P41583]
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** [http://www.uniprot.org/uniprot/Q60254 Q60254]
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** [http://www.uniprot.org/uniprot/P37754 P37754]
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** [http://www.uniprot.org/uniprot/Q59410 Q59410]
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** [http://www.uniprot.org/uniprot/P52207 P52207]
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** [http://www.uniprot.org/uniprot/P70718 P70718]
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** [http://www.uniprot.org/uniprot/Q7M451 Q7M451]
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** [http://www.uniprot.org/uniprot/P41572 P41572]
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** [http://www.uniprot.org/uniprot/P14062 P14062]
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** [http://www.uniprot.org/uniprot/P21577 P21577]
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** [http://www.uniprot.org/uniprot/P38720 P38720]
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** [http://www.uniprot.org/uniprot/Q40311 Q40311]
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** [http://www.uniprot.org/uniprot/P53319 P53319]
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** [http://www.uniprot.org/uniprot/O81237 O81237]
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** [http://www.uniprot.org/uniprot/O81238 O81238]
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** [http://www.uniprot.org/uniprot/O81239 O81239]
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** [http://www.uniprot.org/uniprot/O22111 O22111]
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** [http://www.uniprot.org/uniprot/Q17761 Q17761]
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** [http://www.uniprot.org/uniprot/O32911 O32911]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]}}
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{{#set: ec number=EC-1.1.1.351}}
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{{#set: common name=6PGD|6-phosphogluconic carboxylase|6-phosphogluconic dehydrogenase|Phosphogluconic acid dehydrogenase}}
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{{#set: gene associated=Tiso_gene_91|Tiso_gene_20238|Tiso_gene_7157}}
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{{#set: in pathway=P122-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 00:18, 19 March 2018

Reaction 6PGLUCONDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]
  • ec number:
  • Synonym(s):
    • 6PGD
    • 6-phosphogluconic carboxylase
    • 6-phosphogluconic dehydrogenase
    • Phosphogluconic acid dehydrogenase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

"phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating" cannot be used as a page name in this wiki.




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