Difference between revisions of "PWY-6763"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOLACTOSE-RXN KETOLACTOSE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glycoside_hydro...")
(Created page with "Category:Gene == Gene Tiso_gene_19451 == * right end position: ** 1719 * transcription direction: ** NEGATIVE * left end position: ** 523 * centisome position: ** 22.57229...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOLACTOSE-RXN KETOLACTOSE-RXN] ==
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== Gene Tiso_gene_19451 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1719
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* common name:
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* transcription direction:
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** glycoside_hydrolase
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** NEGATIVE
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** polyprotein
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* left end position:
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* ec number:
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** 523
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** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
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* centisome position:
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** 22.572292   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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** 1 [[WATER]][c] '''+''' 1 [[3-KETOLACTOSE]][c] '''=>''' 1 [[CPD-1242]][c] '''+''' 1 [[Glucopyranose]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 3'-ketolactose[c] '''=>''' 1 3-keto-β-D-galactose[c] '''+''' 1 D-glucopyranose[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17558]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1398]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12839]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[LACTOSEUTIL-PWY]], lactose degradation II: [http://metacyc.org/META/NEW-IMAGE?object=LACTOSEUTIL-PWY LACTOSEUTIL-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[annotation]]
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* [[PWY-5531]]
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** Source: [[annotation-in-silico_annotation]]
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* [[CHLOROPHYLL-SYN]]
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*** Tool: [[pathwaytools]]
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* [[PWY-7159]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1719}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33787 33787]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=523}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04783 R04783]
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{{#set: centisome position=22.572292    }}
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* UNIPROT:
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{{#set: reaction associated=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN}}
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** [http://www.uniprot.org/uniprot/P06219 P06219]
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{{#set: pathway associated=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
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** [http://www.uniprot.org/uniprot/P11175 P11175]
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** [http://www.uniprot.org/uniprot/P19668 P19668]
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** [http://www.uniprot.org/uniprot/P20043 P20043]
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** [http://www.uniprot.org/uniprot/P16278 P16278]
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** [http://www.uniprot.org/uniprot/P23780 P23780]
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** [http://www.uniprot.org/uniprot/P24131 P24131]
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** [http://www.uniprot.org/uniprot/Q02603 Q02603]
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** [http://www.uniprot.org/uniprot/Q53790 Q53790]
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** [http://www.uniprot.org/uniprot/P23989 P23989]
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** [http://www.uniprot.org/uniprot/P48982 P48982]
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** [http://www.uniprot.org/uniprot/Q9UYG5 Q9UYG5]
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** [http://www.uniprot.org/uniprot/Q02604 Q02604]
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** [http://www.uniprot.org/uniprot/P0AC73 P0AC73]
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** [http://www.uniprot.org/uniprot/O58247 O58247]
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** [http://www.uniprot.org/uniprot/Q9UYH2 Q9UYH2]
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** [http://www.uniprot.org/uniprot/P00722 P00722]
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** [http://www.uniprot.org/uniprot/P06864 P06864]
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** [http://www.uniprot.org/uniprot/Q47170 Q47170]
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** [http://www.uniprot.org/uniprot/Q59140 Q59140]
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** [http://www.uniprot.org/uniprot/P00723 P00723]
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** [http://www.uniprot.org/uniprot/P94248 P94248]
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** [http://www.uniprot.org/uniprot/O31341 O31341]
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** [http://www.uniprot.org/uniprot/P22498 P22498]
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** [http://www.uniprot.org/uniprot/Q02401 Q02401]
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** [http://www.uniprot.org/uniprot/P26257 P26257]
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** [http://www.uniprot.org/uniprot/Q59422 Q59422]
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** [http://www.uniprot.org/uniprot/P30812 P30812]
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** [http://www.uniprot.org/uniprot/Q12660 Q12660]
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** [http://www.uniprot.org/uniprot/P45582 P45582]
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** [http://www.uniprot.org/uniprot/P49676 P49676]
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** [http://www.uniprot.org/uniprot/Q9SCV3 Q9SCV3]
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** [http://www.uniprot.org/uniprot/Q9SZI5 Q9SZI5]
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** [http://www.uniprot.org/uniprot/O81100 O81100]
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** [http://www.uniprot.org/uniprot/Q42150 Q42150]
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** [http://www.uniprot.org/uniprot/P48980 P48980]
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** [http://www.uniprot.org/uniprot/P48981 P48981]
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** [http://www.uniprot.org/uniprot/O86616 O86616]
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** [http://www.uniprot.org/uniprot/P70753 P70753]
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** [http://www.uniprot.org/uniprot/P29853 P29853]
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** [http://www.uniprot.org/uniprot/P94804 P94804]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glycoside_hydrolase}}
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{{#set: common name=polyprotein}}
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{{#set: ec number=EC-3.2.1.23}}
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{{#set: gene associated=Tiso_gene_17558|Tiso_gene_1398|Tiso_gene_12839}}
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{{#set: in pathway=LACTOSEUTIL-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:44, 21 March 2018

Gene Tiso_gene_19451

  • right end position:
    • 1719
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 523
  • centisome position:
    • 22.572292
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6763&oldid=29758"