Difference between revisions of "Tiso gene 7719"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-11...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-1118]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1217 TAX-1217]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
−
** sucrose degradation V (sucrose α-glucosidase)
+
** partial TCA cycle (obligate autotrophs)
 
* Synonym(s):
 
* Synonym(s):
 +
** TCA cycle VI (obligate autotrophs)
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''4''' reactions found over '''5''' reactions in the full pathway
+
  '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[3.2.1.48-RXN]]
+
* [[ACONITATEDEHYDR-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_12644]]
+
*** [[Tiso_gene_13007]]
−
** 1 reconstruction source(s) associated:
+
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
* [[KETOHEXOKINASE-RXN]]
+
*** [[orthology-synechocystis]]
 +
* [[ACONITATEHYDR-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_849]]
+
*** [[Tiso_gene_13007]]
−
** 1 reconstruction source(s) associated:
+
** 2 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
* [[RXN-8631]]
+
*** [[annotation-experimental_annotation]]
 +
* [[ASPAMINOTRANS-RXN]]
 
** 6 associated gene(s):
 
** 6 associated gene(s):
−
*** [[Tiso_gene_12272]]
+
*** [[Tiso_gene_17718]]
−
*** [[Tiso_gene_9179]]
+
*** [[Tiso_gene_6815]]
−
*** [[Tiso_gene_14568]]
+
*** [[Tiso_gene_13538]]
−
*** [[Tiso_gene_9119]]
+
*** [[Tiso_gene_15680]]
−
*** [[Tiso_gene_9118]]
+
*** [[Tiso_gene_17809]]
−
*** [[Tiso_gene_65]]
+
*** [[Tiso_gene_12889]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[CITSYN-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18030]]
 +
*** [[Tiso_gene_9601]]
 +
*** [[Tiso_gene_9603]]
 +
*** [[Tiso_gene_9602]]
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_3691]]
 +
*** [[Tiso_gene_6720]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[TRIOSEPISOMERIZATION-RXN]]
+
*** [[annotation-in-silico_annotation]]
−
** 4 associated gene(s):
+
*** [[orthology-athaliana]]
−
*** [[Tiso_gene_20000]]
+
*** [[manual-primary_network]]
−
*** [[Tiso_gene_19961]]
+
*** [[orthology-creinhardtii]]
−
*** [[Tiso_gene_10646]]
+
* [[GLUTDEHYD-RXN]]
−
*** [[Tiso_gene_19962]]
+
** 3 associated gene(s):
 +
*** [[Tiso_gene_2581]]
 +
*** [[Tiso_gene_1154]]
 +
*** [[Tiso_gene_11511]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[ISOCITDEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_18262]]
 +
*** [[Tiso_gene_10809]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[MALATE-DEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
 +
*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_15846]]
 +
*** [[Tiso_gene_11866]]
 
** 7 reconstruction source(s) associated:
 
** 7 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
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*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=TRIOKINASE-RXN TRIOKINASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14970 RXN-14970]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-40674}}
+
{{#set: taxonomic range=TAX-1118}}
−
{{#set: common name=sucrose degradation V (sucrose α-glucosidase)}}
+
{{#set: taxonomic range=TAX-1217}}
−
{{#set: reaction found=4}}
+
{{#set: taxonomic range=TAX-1224}}
−
{{#set: total reaction=5}}
+
{{#set: common name=partial TCA cycle (obligate autotrophs)}}
−
{{#set: completion rate=80.0}}
+
{{#set: common name=TCA cycle VI (obligate autotrophs)}}
 +
{{#set: reaction found=9}}
 +
{{#set: total reaction=11}}
 +
{{#set: completion rate=82.0}}

Revision as of 14:45, 21 March 2018

Pathway PWY-5913

  • taxonomic range:
  • common name:
    • partial TCA cycle (obligate autotrophs)
  • Synonym(s):
    • TCA cycle VI (obligate autotrophs)

Reaction(s) found

9 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7719&oldid=29874"