Difference between revisions of "Tiso gene 14270"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-AMINO-BUTYRATE 4-AMINO-BUTYRATE] == * smiles: ** C(C[N+])CC([O-])=O * inchi key: ** InChIKey=...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12728 RXN-12728] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-AMINO-BUTYRATE 4-AMINO-BUTYRATE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12728 RXN-12728] ==
−
* smiles:
+
* direction:
−
** C(C[N+])CC([O-])=O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
* ec number:
−
** InChIKey=BTCSSZJGUNDROE-UHFFFAOYSA-N
+
** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
−
* common name:
+
−
** 4-aminobutanoate
+
−
* molecular weight:
+
−
** 103.121   
+
 
* Synonym(s):
 
* Synonym(s):
−
** 4-NH2-but
 
−
** 4-NH3-but
 
−
** GABA
 
−
** 4-aminobutyric acid
 
−
** γ-aminobutyrate
 
−
** 4-amino-n-butyric acid
 
−
** γ-amino-n-butyric acid
 
−
** gamma-amino-N-butyrate
 
−
** g-amino-n-butyric acid
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[TRANS-RXN-261]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''+''' 1 [[L-SELENOCYSTEINE]][c] '''=>''' 1 [[CPD-13717]][c] '''+''' 1 [[Pi]][c]
−
* [[ABor]]
+
* With common name(s):
−
* [[AMINOBUTDEHYDROG-RXN]]
+
** 1 O-phospho-L-homoserine[c] '''+''' 1 L-selenocysteine[c] '''=>''' 1 L-selenocystathionine[c] '''+''' 1 phosphate[c]
−
* [[GLUTDECARBOX-RXN]]
+
 
−
* [[TRANS-RXN-261]]
+
== Genes associated with this reaction  ==
−
* [[GUANIDINOBUTYRASE-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
−
== Reaction(s) of unknown directionality ==
+
* Gene: [[Tiso_gene_3732]]
−
* [[GABATRANSAM-RXN]]
+
** Source: [[orthology-creinhardtii]]
−
* [[RXN-14209]]
+
** Source: [[orthology-creinhardtii]]
 +
== Pathways  ==
 +
* [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* CAS : 56-12-2
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* METABOLIGHTS : MTBLC59888
+
{{#set: ec number=EC-2.5.1}}
−
* PUBCHEM:
+
{{#set: gene associated=Tiso_gene_3732}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6992099 6992099]
+
{{#set: in pathway=PWY-6936}}
−
* HMDB : HMDB00112
+
{{#set: reconstruction category=orthology}}
−
* LIGAND-CPD:
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00334 C00334]
+
{{#set: reconstruction tool=pantograph}}
−
* CHEBI:
+
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=59888 59888]
+
−
* BIGG : 4abut
+
−
{{#set: smiles=C(C[N+])CC([O-])=O}}
+
−
{{#set: inchi key=InChIKey=BTCSSZJGUNDROE-UHFFFAOYSA-N}}
+
−
{{#set: common name=4-aminobutanoate}}
+
−
{{#set: molecular weight=103.121    }}
+
−
{{#set: common name=4-NH2-but|4-NH3-but|GABA|4-aminobutyric acid|γ-aminobutyrate|4-amino-n-butyric acid|γ-amino-n-butyric acid|gamma-amino-N-butyrate|g-amino-n-butyric acid}}
+
−
{{#set: consumed by=TRANS-RXN-261}}
+
−
{{#set: produced by=ABor|AMINOBUTDEHYDROG-RXN|GLUTDECARBOX-RXN|TRANS-RXN-261|GUANIDINOBUTYRASE-RXN}}
+
−
{{#set: reversible reaction associated=GABATRANSAM-RXN|RXN-14209}}
+

Revision as of 14:45, 21 March 2018

Reaction RXN-12728

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6936, seleno-amino acid biosynthesis: PWY-6936
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14270&oldid=29949"