Difference between revisions of "DNA-LIGASE-ATP-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16133 RXN-16133] == * direction: ** REVERSIBLE * common name: ** 3-hydroxyacyl-_dehydrogenase *...")
(Created page with "Category:Gene == Gene Tiso_gene_12478 == * right end position: ** 4606 * transcription direction: ** NEGATIVE * left end position: ** 1033 * centisome position: ** 14.8440...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16133 RXN-16133] ==
+
== Gene Tiso_gene_12478 ==
−
* direction:
+
* right end position:
−
** REVERSIBLE
+
** 4606
−
* common name:
+
* transcription direction:
−
** 3-hydroxyacyl-_dehydrogenase
+
** NEGATIVE
−
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
+
* left end position:
−
** hydroxyacyl-coenzyme_a_mitochondrial
+
** 1033
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
+
** 14.844087   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[LYSOPHOSPHOLIPASE-RXN]]
−
** 1 [[NAD]][c] '''+''' 1 [[L-3-HYDROXYACYL-COA]][c] '''<=>''' 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 NAD+[c] '''+''' 1 a (3S)-3-hydroxyacyl-CoA[c] '''<=>''' 1 a 3-oxoacyl-CoA[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
+
* Reaction: [[RXN-15035]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_5857]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18838]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14262]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18839]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14026]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
−
** Source: [[annotation-experimental_annotation]]
+
== Pathways associated ==
−
*** Tool: [[pathwaytools]]
+
* [[PWY-7409]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
{{#set: right end position=4606}}
−
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
+
{{#set: left end position=1033}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
+
{{#set: centisome position=14.844087    }}
−
{{#set: ec number=EC-1.1.1.35}}
+
{{#set: reaction associated=LYSOPHOSPHOLIPASE-RXN|RXN-15035}}
−
{{#set: gene associated=Tiso_gene_5857|Tiso_gene_18838|Tiso_gene_14262|Tiso_gene_18839|Tiso_gene_14026}}
+
{{#set: pathway associated=PWY-7409}}
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 14:45, 21 March 2018

Gene Tiso_gene_12478

  • right end position:
    • 4606
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1033
  • centisome position:
    • 14.844087
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DNA-LIGASE-ATP-RXN&oldid=30000"