Difference between revisions of "Tiso gene 3445"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-66 PWY-66] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] ** [ht...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14192 RXN-14192] == * direction: ** REVERSIBLE * common name: ** pyruvate_kinase * ec number: *...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-66 PWY-66] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14192 RXN-14192] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** REVERSIBLE
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
 
* common name:
 
* common name:
−
** GDP-L-fucose biosynthesis I (from GDP-D-mannose)
+
** pyruvate_kinase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.1.40 EC-2.7.1.40]
 
* Synonym(s):
 
* Synonym(s):
−
** GDP-L-fucose biosynthesis I (de novo synthesis)
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''2''' reactions found over '''2''' reactions in the full pathway
+
* With identifiers:
−
* [[1.1.1.271-RXN]]
+
** 1 [[DATP]][c] '''+''' 1 [[PYRUVATE]][c] '''<=>''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DADP]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_16970]]
+
** 1 dATP[c] '''+''' 1 pyruvate[c] '''<=>''' 1 phosphoenolpyruvate[c] '''+''' 1 H+[c] '''+''' 1 dADP[c]
−
** 3 reconstruction source(s) associated:
+
 
−
*** [[orthology-athaliana]]
+
== Genes associated with this reaction  ==
−
*** [[annotation-experimental_annotation]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_18206]]
−
* [[GDPMANDEHYDRA-RXN]]
+
** Source: [[annotation-experimental_annotation]]
−
** 2 associated gene(s):
+
*** Assignment: EC-NUMBER
−
*** [[Tiso_gene_13093]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[Tiso_gene_13092]]
+
* Gene: [[Tiso_gene_14505]]
−
** 3 reconstruction source(s) associated:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-athaliana]]
+
*** Assignment: EC-NUMBER
−
*** [[annotation-experimental_annotation]]
+
* Gene: [[Tiso_gene_14504]]
−
*** [[orthology-esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
== Reaction(s) not found ==
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_974]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
* RHEA:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-66 PWY-66]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30730 30730]
−
* ARACYC:
+
* LIGAND-RXN:
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-66 PWY-66]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01138 R01138]
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: taxonomic range=TAX-2759}}
+
{{#set: common name=pyruvate_kinase}}
−
{{#set: common name=GDP-L-fucose biosynthesis I (from GDP-D-mannose)}}
+
{{#set: ec number=EC-2.7.1.40}}
−
{{#set: common name=GDP-L-fucose biosynthesis I (de novo synthesis)}}
+
{{#set: gene associated=Tiso_gene_18206|Tiso_gene_14505|Tiso_gene_14504|Tiso_gene_974}}
−
{{#set: reaction found=2}}
+
{{#set: in pathway=}}
−
{{#set: total reaction=2}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: completion rate=100.0}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-creinhardtii|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:46, 21 March 2018

Reaction RXN-14192

  • direction:
    • REVERSIBLE
  • common name:
    • pyruvate_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3445&oldid=30123"