Difference between revisions of "RXN-18209"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydro...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5143 PWY-5143] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5143 PWY-5143] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
−
** dihydrodipicolinate_synthase
+
** long-chain fatty acid activation
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/4.3.3.7 EC-4.3.3.7]
+
 
* Synonym(s):
 
* Synonym(s):
−
** dihydropicolinate synthetase
+
** long-chain acyl-CoA synthetase pathway
−
** dihydrodipicolinic acid synthase
+
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''1''' reactions in the full pathway
−
** 1 [[PYRUVATE]][c] '''+''' 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''=>''' 1 [[CPD-14443]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
+
* [[RXN-7904]]
−
* With common name(s):
+
** 9 associated gene(s):
−
** 1 pyruvate[c] '''+''' 1 L-aspartate-semialdehyde[c] '''=>''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H+[c] '''+''' 1 H2O[c]
+
*** [[Tiso_gene_348]]
−
 
+
*** [[Tiso_gene_135]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_500]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_7855]]
−
* [[Tiso_gene_14829]]
+
*** [[Tiso_gene_10876]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_13394]]
−
***AUTOMATED-NAME-MATCH
+
*** [[Tiso_gene_9394]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_136]]
−
== Pathways  ==
+
*** [[Tiso_gene_4191]]
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
+
** 3 reconstruction source(s) associated:
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
*** [[annotation-in-silico_annotation]]
−
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
+
*** [[annotation-experimental_annotation]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
*** [[orthology-esiliculosus]]
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
+
== Reaction(s) not found ==
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[manual]]
+
−
** Source: [[manual-primary_network]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* ARACYC:
−
** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5143 PWY-5143]
−
** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
+
{{#set: taxonomic range=TAX-2157}}
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.uniprot.org/uniprot/P43797 P43797]
+
{{#set: taxonomic range=TAX-2759}}
−
** [http://www.uniprot.org/uniprot/O26892 O26892]
+
{{#set: common name=long-chain fatty acid activation}}
−
** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
+
{{#set: common name=long-chain acyl-CoA synthetase pathway}}
−
** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
+
{{#set: reaction found=1}}
−
** [http://www.uniprot.org/uniprot/P19808 P19808]
+
{{#set: total reaction=1}}
−
** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
+
{{#set: completion rate=100.0}}
−
** [http://www.uniprot.org/uniprot/O05969 O05969]
+
−
** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
+
−
** [http://www.uniprot.org/uniprot/Q04796 Q04796]
+
−
** [http://www.uniprot.org/uniprot/Q57695 Q57695]
+
−
** [http://www.uniprot.org/uniprot/O25657 O25657]
+
−
** [http://www.uniprot.org/uniprot/O67216 O67216]
+
−
** [http://www.uniprot.org/uniprot/O29352 O29352]
+
−
** [http://www.uniprot.org/uniprot/O84366 O84366]
+
−
** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
+
−
** [http://www.uniprot.org/uniprot/P63945 P63945]
+
−
** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
+
−
** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
+
−
** [http://www.uniprot.org/uniprot/Q43038 Q43038]
+
−
** [http://www.uniprot.org/uniprot/P49423 P49423]
+
−
** [http://www.uniprot.org/uniprot/Q55513 Q55513]
+
−
** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
+
−
** [http://www.uniprot.org/uniprot/Q42948 Q42948]
+
−
** [http://www.uniprot.org/uniprot/Q42940 Q42940]
+
−
** [http://www.uniprot.org/uniprot/O86841 O86841]
+
−
** [http://www.uniprot.org/uniprot/P24847 P24847]
+
−
** [http://www.uniprot.org/uniprot/P24846 P24846]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=dihydrodipicolinate_synthase}}
+
−
{{#set: ec number=EC-4.3.3.7}}
+
−
{{#set: common name=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}}
+
−
{{#set: gene associated=Tiso_gene_14829}}
+
−
{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 15:47, 21 March 2018

Pathway PWY-5143

  • taxonomic range:
  • common name:
    • long-chain fatty acid activation
  • Synonym(s):
    • long-chain acyl-CoA synthetase pathway

Reaction(s) found

1 reactions found over 1 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-18209&oldid=30235"