Difference between revisions of "PWY-6121"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE-RACEMASE-RXN ASPARTATE-RACEMASE-RXN] == * direction: ** REVERSIBLE * common name: ** ORF...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE-RACEMASE-RXN ASPARTATE-RACEMASE-RXN] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** REVERSIBLE
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3208 TAX-3208]
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* common name:
 
* common name:
** docosahexaenoate biosynthesis I (lower eukaryotes)
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/5.1.1.13 EC-5.1.1.13]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''4''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
* [[RXN-13442]]
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** 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[CPD-302]][c]
** 0 associated gene:
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* With common name(s):
** 2 reconstruction source(s) associated:
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** 1 L-aspartate[c] '''<=>''' 1 D-aspartate[c]
*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
* [[RXN-13443]]
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Genes have been associated with this reaction based on different elements listed below.
** 3 associated gene(s):
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* Gene: [[Tiso_gene_16719]]
*** [[Tiso_gene_9871]]
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** Source: [[annotation-in-silico_annotation]]
*** [[Tiso_gene_9885]]
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*** Assignment: EC-NUMBER
*** [[Tiso_gene_13083]]
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== Pathways  ==
** 3 reconstruction source(s) associated:
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== Reconstruction information  ==
*** [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
*** [[orthology-esiliculosus]]
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*** Tool: [[pathwaytools]]
* [[RXN-13444]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-13445]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12797 RXN-12797]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16102 RXN-16102]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17688 RXN-17688]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2759}}
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* RHEA:
{{#set: taxonomic range=TAX-3041}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14973 14973]
{{#set: taxonomic range=TAX-3208}}
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* LIGAND-RXN:
{{#set: common name=docosahexaenoate biosynthesis I (lower eukaryotes)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00491 R00491]
{{#set: reaction found=4}}
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* UNIPROT:
{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/Q9CDJ4 Q9CDJ4]
{{#set: completion rate=57.0}}
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** [http://www.uniprot.org/uniprot/P29079 P29079]
 +
** [http://www.uniprot.org/uniprot/P71164 P71164]
 +
{{#set: direction=REVERSIBLE}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-5.1.1.13}}
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{{#set: gene associated=Tiso_gene_16719}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:49, 21 March 2018

Reaction ASPARTATE-RACEMASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-aspartate[c] <=> 1 D-aspartate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links