Difference between revisions of "GLT"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7908 RXN-7908] == * direction: ** LEFT-TO-RIGHT * common name: ** transcriptional_coactivator_p...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17736 RXN-17736] == * direction: ** LEFT-TO-RIGHT * common name: ** abhydrolase_domain-containi...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7908 RXN-7908] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17736 RXN-17736] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** transcriptional_coactivator_pterin_dehydratase
+
** abhydrolase_domain-containing_protein_4-like
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.96 EC-4.2.1.96]
+
** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-5881]][c] '''=>''' 1 [[BIOPTERIN]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[PLASMENYLCHOLINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Long-Chain-Fatty-Acids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-563]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 4α-hydroxy-tetrahydrobiopterin[c] '''=>''' 1 7,8-dihydrobiopterin[c] '''+''' 1 H2O[c]
+
** 1 a plasmenylcholine[c] '''+''' 1 H2O[c] '''=>''' 1 a long-chain fatty acid[c] '''+''' 1 H+[c] '''+''' 1 a 1-(1-alkenyl)-sn-glycero-3-phosphocholine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14845]]
+
* Gene: [[Tiso_gene_12959]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_15046]]
−
* [[Tiso_gene_14844]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_12960]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15047]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PHENYLALANINE-DEG1-PWY]], L-phenylalanine degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-DEG1-PWY PHENYLALANINE-DEG1-PWY]
+
* [[PWY-7783]], plasmalogen degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7783 PWY-7783]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11920 11920]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04734 R04734]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=transcriptional_coactivator_pterin_dehydratase}}
+
{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
−
{{#set: ec number=EC-4.2.1.96}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_14845|Tiso_gene_14844}}
+
{{#set: ec number=EC-3.1.1.4}}
−
{{#set: in pathway=PHENYLALANINE-DEG1-PWY}}
+
{{#set: gene associated=Tiso_gene_12959|Tiso_gene_15046|Tiso_gene_12960|Tiso_gene_15047}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: in pathway=PWY-7783}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:49, 21 March 2018

Reaction RXN-17736

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • abhydrolase_domain-containing_protein_4-like
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7783, plasmalogen degradation: PWY-7783
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLT&oldid=30457"