Difference between revisions of "RXN66-343"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEAM-RXN HOMOSERDEAM-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
(Created page with "Category:Gene == Gene Tiso_gene_3732 == * right end position: ** 3733 * transcription direction: ** POSITIVE * left end position: ** 525 * centisome position: ** 2.1731932...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEAM-RXN HOMOSERDEAM-RXN] ==
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== Gene Tiso_gene_3732 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3733
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1]
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** POSITIVE
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* left end position:
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** 525
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* centisome position:
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** 2.1731932   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACETYLHOMOSER-CYS-RXN]]
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** 1 [[HOMO-SER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[ACHMSSELCYSL]]
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** 1 L-homoserine[c] '''=>''' 1 2-oxobutanoate[c] '''+''' 1 ammonium[c]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[ACHMSSELCYSLh]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
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* [[Tiso_gene_3732]]
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** Source: [[orthology-creinhardtii]]
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[CYSTHIOCYS-RXN]]
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== Pathways  ==
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** Source: [[orthology-esiliculosus]]
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== Reconstruction information  ==
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** Source: [[orthology-creinhardtii]]
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* Category: [[orthology]]
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* Reaction: [[HOMOSERDEAM-RXN]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[LCYSDESULF-RXN]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[METBALT-RXN]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[O-SUCCHOMOSERLYASE-RXN]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-12728]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-12729]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-14048]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14049]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-15128]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-15129]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-15130]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-15131]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-15137]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9384]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[SUCHMSSELCYSL]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[SUCHMSSELCYSLh]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[SULFOCYS-RXN]]
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** Source: [[orthology-athaliana]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[PWY-5344]]
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* [[PWY-6936]]
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* [[PWY-I9]]
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* [[LCYSDEG-PWY]]
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* [[HOMOSER-METSYN-PWY]]
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* [[PWY-702]]
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* [[HOMOCYSDEGR-PWY]]
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* [[PWY-801]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3733}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24923 24923]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=525}}
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{{#set: ec number=EC-4.4.1.1}}
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{{#set: centisome position=2.1731932    }}
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{{#set: gene associated=Tiso_gene_3732}}
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{{#set: reaction associated=ACETYLHOMOSER-CYS-RXN|ACHMSSELCYSL|ACHMSSELCYSLh|CYSTATHIONINE-BETA-SYNTHASE-RXN|CYSTHIOCYS-RXN|HOMOSERDEAM-RXN|LCYSDESULF-RXN|METBALT-RXN|O-SUCCHOMOSERLYASE-RXN|RXN-12728|RXN-12729|RXN-14048|RXN-14049|RXN-15128|RXN-15129|RXN-15130|RXN-15131|RXN-15137|RXN-9384|SUCHMSSELCYSL|SUCHMSSELCYSLh|SULFOCYS-RXN}}
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{{#set: in pathway=}}
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{{#set: pathway associated=PWY-5344|PWY-6936|PWY-I9|LCYSDEG-PWY|HOMOSER-METSYN-PWY|PWY-702|HOMOCYSDEGR-PWY|PWY-801}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 14:50, 21 March 2018

Gene Tiso_gene_3732

  • right end position:
    • 3733
  • transcription direction:
    • POSITIVE
  • left end position:
    • 525
  • centisome position:
    • 2.1731932
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN66-343&oldid=30611"