Difference between revisions of "3-terminal-unsaturated-sugars"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5941 PWY-5941] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3661 RXN-3661] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5941 PWY-5941] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3661 RXN-3661] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
* ec number:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
+
** [http://enzyme.expasy.org/EC/1.14.12.23 EC-1.14.12.23]
* common name:
+
** glycogen degradation II
+
 
* Synonym(s):
 
* Synonym(s):
** glycogenolysis II
 
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''3''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
* [[GLYCOPHOSPHORYL-RXN]]
+
** 1 [[BENZENE-NO2]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CATECHOL]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[NITRITE]][c]
** 1 associated gene(s):
+
* With common name(s):
*** [[Tiso_gene_1011]]
+
** 1 nitrobenzene[c] '''+''' 1 NADH[c] '''+''' 1 oxygen[c] '''=>''' 1 catechol[c] '''+''' 1 NAD+[c] '''+''' 1 nitrite[c]
** 1 reconstruction source(s) associated:
+
 
*** [[annotation-in-silico_annotation]]
+
== Genes associated with this reaction  ==
* [[PHOSPHOGLUCMUT-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
** 2 associated gene(s):
+
* Gene: [[Tiso_gene_8263]]
*** [[Tiso_gene_13477]]
+
** Source: [[orthology-athaliana]]
*** [[Tiso_gene_4816]]
+
** Source: [[orthology-esiliculosus]]
** 3 reconstruction source(s) associated:
+
* Gene: [[Tiso_gene_1547]]
*** [[annotation-in-silico_annotation]]
+
** Source: [[orthology-athaliana]]
*** [[manual-primary_network]]
+
* Gene: [[Tiso_gene_3577]]
*** [[annotation-experimental_annotation]]
+
** Source: [[orthology-esiliculosus]]
* [[RXN-9025]]
+
== Pathways  ==
** 1 associated gene(s):
+
* [[PWY-5640]], nitrobenzene degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5640 PWY-5640]
*** [[Tiso_gene_1011]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
** 1 reconstruction source(s) associated:
+
== Reconstruction information  ==
*** [[annotation-in-silico_annotation]]
+
* Category: [[orthology]]
== Reaction(s) not found ==
+
** Source: [[orthology-athaliana]]
* [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.33-RXN 3.2.1.33-RXN]
+
*** Tool: [[pantograph]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9023 RXN-9023]
+
** Source: [[orthology-esiliculosus]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9024 RXN-9024]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2157}}
+
* LIGAND-RXN:
{{#set: taxonomic range=TAX-2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07706 R07706]
{{#set: taxonomic range=TAX-33154}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=glycogen degradation II}}
+
{{#set: ec number=EC-1.14.12.23}}
{{#set: common name=glycogenolysis II}}
+
{{#set: gene associated=Tiso_gene_8263|Tiso_gene_1547|Tiso_gene_3577}}
{{#set: reaction found=3}}
+
{{#set: in pathway=PWY-5640}}
{{#set: total reaction=6}}
+
{{#set: reconstruction category=orthology}}
{{#set: completion rate=50.0}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 14:50, 21 March 2018

Reaction RXN-3661

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5640, nitrobenzene degradation II: PWY-5640
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links