Difference between revisions of "Tiso gene 19083"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.20-RXN 1.5.1.20-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** methylenetetrahydrofo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKGDHe2r AKGDHe2r] == * direction: ** REVERSIBLE * common name: ** 2-oxoglutarate dehydrogenase E2...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.20-RXN 1.5.1.20-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKGDHe2r AKGDHe2r] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** methylenetetrahydrofolate_reductase
+
** 2-oxoglutarate dehydrogenase E2 component
−
** -methylenetetrahydrofolate_reductase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.5.1.20 EC-1.5.1.20]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[5-METHYL-THF-GLU-N]][c]
+
** 1.0 [[CPD0-341]][m] '''+''' 1.0 [[CO-A]][m] '''+''' 1.0 [[PROTON]][m] '''<=>''' 1.0 [[DIHYDROLIPOAMIDE]][m] '''+''' 1.0 [[SUC-COA]][m]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''=>''' 1 NAD+[c] '''+''' 1 an N5-methyl-tetrahydrofolate[c]
+
** 1.0 S-succinyl-dihydrolipoamide[m] '''+''' 1.0 coenzyme A[m] '''+''' 1.0 H+[m] '''<=>''' 1.0 dihydrolipoamide[m] '''+''' 1.0 succinyl-CoA[m]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14582]]
+
* Gene: [[Tiso_gene_10209]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16954]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 
−
** '''7''' reactions found over '''12''' reactions in the full pathway
 
−
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07168 R07168]
+
{{#set: common name=2-oxoglutarate dehydrogenase E2 component}}
−
* UNIPROT:
+
{{#set: gene associated=Tiso_gene_10209}}
−
** [http://www.uniprot.org/uniprot/Q9PN93 Q9PN93]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/Q9JUT7 Q9JUT7]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/P45208 P45208]
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
** [http://www.uniprot.org/uniprot/P0AEZ1 P0AEZ1]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P11003 P11003]
+
−
** [http://www.uniprot.org/uniprot/P46151 P46151]
+
−
** [http://www.uniprot.org/uniprot/P53128 P53128]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=methylenetetrahydrofolate_reductase}}
+
−
{{#set: common name=-methylenetetrahydrofolate_reductase}}
+
−
{{#set: ec number=EC-1.5.1.20}}
+
−
{{#set: gene associated=Tiso_gene_14582|Tiso_gene_16954}}
+
−
{{#set: in pathway=PWY-2201|1CMET2-PWY|PWY-3841|CODH-PWY}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 15:50, 21 March 2018

Reaction AKGDHe2r

  • direction:
    • REVERSIBLE
  • common name:
    • 2-oxoglutarate dehydrogenase E2 component
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 S-succinyl-dihydrolipoamide[m] + 1.0 coenzyme A[m] + 1.0 H+[m] <=> 1.0 dihydrolipoamide[m] + 1.0 succinyl-CoA[m]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19083&oldid=30649"