Difference between revisions of "PWY-6309"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14213 RXN-14213] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14213 RXN-14213] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3803 TAX-3803]
 
* common name:
 
* common name:
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** ORF
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** urate biosynthesis/inosine 5'-phosphate degradation
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.1 EC-3.6.1]
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* Synonym(s):
 
* Synonym(s):
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** ureide biogenesis
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** inosine 5'-phosphate degradation
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** IMP degradation
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** urate biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[TDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[TMP]][c] '''+''' 1 [[Pi]][c]
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* [[IMP-DEHYDROG-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 dTDP[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 dTMP[c] '''+''' 1 phosphate[c]
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*** [[Tiso_gene_6377]]
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** 7 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_20236]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-athaliana]]
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* [[Tiso_gene_12899]]
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*** [[orthology-synechocystis]]
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***EC-NUMBER
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*** [[orthology-creinhardtii]]
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** EXPERIMENTAL_ANNOTATION
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* [[RXN0-901]]
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***EC-NUMBER
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** 1 associated gene(s):
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_11775]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-athaliana]]
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* Category: [[orthology]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
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* [[XANTHOSINEPHOSPHORY-RXN]]
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*** Tool: [[pantograph]]
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** 0 associated gene:
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** Source: [[orthology-esiliculosus]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
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* [[XMPXAN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 7 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_14435]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_6640]]
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_14434]]
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*** [[Tiso_gene_13929]]
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*** [[Tiso_gene_5911]]
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*** [[Tiso_gene_14246]]
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*** [[Tiso_gene_6988]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=ORF}}
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{{#set: taxonomic range=TAX-33208}}
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{{#set: ec number=EC-3.6.1}}
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{{#set: taxonomic range=TAX-3803}}
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{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
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{{#set: common name=urate biosynthesis/inosine 5'-phosphate degradation}}
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{{#set: in pathway=}}
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{{#set: common name=ureide biogenesis|inosine 5'-phosphate degradation|IMP degradation|urate biosynthesis}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reaction found=4}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: total reaction=4}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: completion rate=100.0}}

Revision as of 14:50, 21 March 2018

Pathway PWY-5695

  • taxonomic range:
  • common name:
    • urate biosynthesis/inosine 5'-phosphate degradation
  • Synonym(s):
    • ureide biogenesis
    • inosine 5'-phosphate degradation
    • IMP degradation
    • urate biosynthesis

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6309&oldid=30669"