Difference between revisions of "RXN-9662"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6703 PWY-6703] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OH2OXOGLUTARALDOL-RXN 4OH2OXOGLUTARALDOL-RXN] == * direction: ** REVERSIBLE * ec number: ** [http:...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6703 PWY-6703] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OH2OXOGLUTARALDOL-RXN 4OH2OXOGLUTARALDOL-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** REVERSIBLE
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* common name:
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* ec number:
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** preQ0 biosynthesis
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** [http://enzyme.expasy.org/EC/4.1.3.16 EC-4.1.3.16]
 
* Synonym(s):
 
* Synonym(s):
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** deazapurine biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[GTP-CYCLOHYDRO-I-RXN]]
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** 1 [[CPD-15015]][c] '''<=>''' 1 [[GLYOX]][c] '''+''' 1 [[PYRUVATE]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_12736]]
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** 1 4-hydroxy-2-oxoglutarate[c] '''<=>''' 1 glyoxylate[c] '''+''' 1 pyruvate[c]
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** 3 reconstruction source(s) associated:
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*** [[orthology-creinhardtii]]
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== Genes associated with this reaction  ==
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*** [[orthology-synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_12620]]
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* [[RXN-12093]]
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** Source: [[orthology-esiliculosus]]
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** 1 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_10965]]
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* [[HYDROXYPRODEG-PWY]], trans-4-hydroxy-L-proline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPRODEG-PWY HYDROXYPRODEG-PWY]
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** 1 reconstruction source(s) associated:
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** '''1''' reactions found over '''5''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5507 RXN0-5507]
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** Source: [[orthology-esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6575 RXN0-6575]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6703 PWY-6703]
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** [http://www.genome.jp/dbget-bin/www_bget?R00470 R00470]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=preQ0 biosynthesis}}
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** [http://www.uniprot.org/uniprot/P44480 P44480]
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{{#set: common name=deazapurine biosynthesis}}
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** [http://www.uniprot.org/uniprot/P0A955 P0A955]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/Q9JR44 Q9JR44]
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/O25729 O25729]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/Q9ZKB4 Q9ZKB4]
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** [http://www.uniprot.org/uniprot/O83578 O83578]
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** [http://www.uniprot.org/uniprot/Q9WXS1 Q9WXS1]
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** [http://www.uniprot.org/uniprot/P50846 P50846]
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** [http://www.uniprot.org/uniprot/P38448 P38448]
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** [http://www.uniprot.org/uniprot/Q55872 Q55872]
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** [http://www.uniprot.org/uniprot/P94802 P94802]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-4.1.3.16}}
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{{#set: gene associated=Tiso_gene_12620}}
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{{#set: in pathway=HYDROXYPRODEG-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 15:51, 21 March 2018

Reaction 4OH2OXOGLUTARALDOL-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-hydroxy-2-oxoglutarate[c] <=> 1 glyoxylate[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-9662&oldid=30695"