Difference between revisions of "Ribuloses"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13614 RXN-13614] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** acyl...")
(Created page with "Category:Gene == Gene Tiso_gene_18217 == * right end position: ** 3104 * transcription direction: ** NEGATIVE * left end position: ** 259 * centisome position: ** 8.175505...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13614 RXN-13614] ==
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== Gene Tiso_gene_18217 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 3104
* common name:
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* transcription direction:
** polyketide_synthase
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** NEGATIVE
** acyl-_synthetase
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* left end position:
** ORF
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** 259
** long_chain_acyl-_synthetase
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* centisome position:
* ec number:
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** 8.175505   
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[RIB5PISOM-RXN]]
** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-3617]][c] '''=>''' 1 [[CPD-10267]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: ec-number
** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 decanoate[c] '''=>''' 1 decanoyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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** Source: [[orthology-athaliana]]
 
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** Source: [[orthology-athaliana]]
== Genes associated with this reaction  ==
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** Source: [[orthology-synechocystis]]
Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
*** Tool: [[pantograph]]
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== Pathways associated ==
* Category: [[annotation]]
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* [[P124-PWY]]
** Source: [[annotation-in-silico_annotation]]
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* [[CALVIN-PWY]]
*** Tool: [[pathwaytools]]
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* [[PWY-5723]]
** Source: [[annotation-experimental_annotation]]
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* [[PWY-1861]]
*** Tool: [[pathwaytools]]
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* [[P185-PWY]]
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* [[NONOXIPENT-PWY]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3104}}
{{#set: common name=polyketide_synthase}}
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{{#set: transcription direction=NEGATIVE}}
{{#set: common name=acyl-_synthetase}}
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{{#set: left end position=259}}
{{#set: common name=ORF}}
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{{#set: centisome position=8.175505    }}
{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: reaction associated=RIB5PISOM-RXN}}
{{#set: ec number=EC-6.2.1.3}}
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{{#set: pathway associated=P124-PWY|CALVIN-PWY|PWY-5723|PWY-1861|P185-PWY|NONOXIPENT-PWY}}
{{#set: gene associated=Tiso_gene_135|Tiso_gene_10876|Tiso_gene_348|Tiso_gene_4191|Tiso_gene_7855|Tiso_gene_136|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_9394}}
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{{#set: in pathway=PWY-7094}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:51, 21 March 2018

Gene Tiso_gene_18217

  • right end position:
    • 3104
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 259
  • centisome position:
    • 8.175505
  • Synonym(s):

Reactions associated

Pathways associated

External links