Difference between revisions of "2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.24-RXN 2.7.8.24-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-580...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.24-RXN 2.7.8.24-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.7.8.24 EC-2.7.8.24]
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** phenylpropanoid biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** monolignol biosynthesis
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** lignin biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''7''' reactions found over '''15''' reactions in the full pathway
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** 1 [[CHOLINE]][c] '''+''' 1 [[CDPDIACYLGLYCEROL]][c] '''=>''' 1 [[PHOSPHATIDYLCHOLINE]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 choline[c] '''+''' 1 a CDP-diacylglycerol[c] '''=>''' 1 a phosphatidylcholine[c] '''+''' 1 CMP[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_12275]]
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*** [[Tiso_gene_14183]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-athaliana]]
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* [[PWY-6826]], phosphatidylcholine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6826 PWY-6826]
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*** [[orthology-esiliculosus]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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== Reconstruction information  ==
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** 2 associated gene(s):
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* Category: [[gap-filling]]
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*** [[Tiso_gene_10561]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** [[Tiso_gene_14561]]
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*** Tool: [[meneco]]
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** 2 reconstruction source(s) associated:
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**** Comment: [[added for gapfilling]]
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-1101]]
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** 3 associated gene(s):
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*** [[Tiso_gene_15272]]
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*** [[Tiso_gene_9504]]
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*** [[Tiso_gene_11016]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-1102]]
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** 2 associated gene(s):
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*** [[Tiso_gene_15088]]
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*** [[Tiso_gene_16681]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-1106]]
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** 3 associated gene(s):
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*** [[Tiso_gene_11016]]
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*** [[Tiso_gene_15272]]
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*** [[Tiso_gene_9504]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-1125]]
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** 2 associated gene(s):
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*** [[Tiso_gene_15088]]
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*** [[Tiso_gene_16681]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-1143]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18257]]
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*** [[Tiso_gene_18971]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.36-RXN 1.14.13.36-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.133-RXN 2.3.1.133-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1142 RXN-1142]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2581 RXN-2581]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2601 RXN-2601]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2602 RXN-2602]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2621 RXN-2621]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2622 RXN-2622]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14597 14597]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-361 PWY-361]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-58024}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05794 R05794]
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{{#set: common name=phenylpropanoid biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=monolignol biosynthesis|lignin biosynthesis}}
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{{#set: ec number=EC-2.7.8.24}}
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{{#set: reaction found=7}}
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{{#set: in pathway=PWY-6826}}
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{{#set: total reaction=15}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: completion rate=47.0}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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−
{{#set: reconstruction tool=meneco}}
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−
{{#set: reconstruction comment=added for gapfilling}}
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Revision as of 14:51, 21 March 2018

Pathway PWY-361

  • taxonomic range:
  • common name:
    • phenylpropanoid biosynthesis
  • Synonym(s):
    • monolignol biosynthesis
    • lignin biosynthesis

Reaction(s) found

7 reactions found over 15 reactions in the full pathway

Reaction(s) not found

External links




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