Difference between revisions of "Tiso gene 3016"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATESYN-RXN GLUTAMATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-de...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7659 PWY-7659] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATESYN-RXN GLUTAMATESYN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7659 PWY-7659] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
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** ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
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** viridicatumtoxin biosynthesis
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** glutamate_synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.4.1.13 EC-1.4.1.13]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''9''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[NADP]][c] '''+''' 2 [[GLT]][c]
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* [[GPPSYN-RXN]]
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* With common name(s):
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** 9 associated gene(s):
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 L-glutamine[c] '''=>''' 1 NADP+[c] '''+''' 2 L-glutamate[c]
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*** [[Tiso_gene_19542]]
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*** [[Tiso_gene_18201]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_16284]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_2848]]
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* [[Tiso_gene_11511]]
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*** [[Tiso_gene_1035]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_4719]]
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***EC-NUMBER
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*** [[Tiso_gene_11582]]
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* [[Tiso_gene_2581]]
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*** [[Tiso_gene_13582]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_10317]]
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***EC-NUMBER
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** 5 reconstruction source(s) associated:
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** EXPERIMENTAL_ANNOTATION
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*** [[orthology-athaliana]]
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***EC-NUMBER
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*** [[orthology-creinhardtii]]
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** [[pantograph]]-[[athaliana]]
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*** [[orthology-synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_1154]]
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*** [[manual-primary_network]]
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** IN-SILICO_ANNOTATION
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== Reaction(s) not found ==
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16575 RXN-16575]
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** EXPERIMENTAL_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16576 RXN-16576]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16577 RXN-16577]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16578 RXN-16578]
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* [[GLUTAMINEFUM-PWY]], L-glutamine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINEFUM-PWY GLUTAMINEFUM-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16579 RXN-16579]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16580 RXN-16580]
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* [[GLUTSYN-PWY]], L-glutamate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYN-PWY GLUTSYN-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16581 RXN-16581]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16582 RXN-16582]
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15501 15501]
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{{#set: common name=viridicatumtoxin biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00114 R00114]
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{{#set: total reaction=9}}
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* UNIPROT:
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{{#set: completion rate=11.0}}
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** [http://www.uniprot.org/uniprot/Q05756 Q05756]
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** [http://www.uniprot.org/uniprot/Q05755 Q05755]
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** [http://www.uniprot.org/uniprot/Q9PJA4 Q9PJA4]
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** [http://www.uniprot.org/uniprot/Q9PJA2 Q9PJA2]
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** [http://www.uniprot.org/uniprot/Q9CG25 Q9CG25]
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** [http://www.uniprot.org/uniprot/Q58746 Q58746]
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** [http://www.uniprot.org/uniprot/P09831 P09831]
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** [http://www.uniprot.org/uniprot/Q9CG24 Q9CG24]
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** [http://www.uniprot.org/uniprot/P09832 P09832]
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** [http://www.uniprot.org/uniprot/P39812 P39812]
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** [http://www.uniprot.org/uniprot/Q9S2Y9 Q9S2Y9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits}}
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{{#set: common name=glutamate_synthase}}
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{{#set: ec number=EC-1.4.1.13}}
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{{#set: gene associated=Tiso_gene_11511|Tiso_gene_2581|Tiso_gene_1154}}
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{{#set: in pathway=GLUTAMINEFUM-PWY|GLUTSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:52, 21 March 2018

Pathway PWY-7659

  • taxonomic range:
  • common name:
    • viridicatumtoxin biosynthesis
  • Synonym(s):

Reaction(s) found

1 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3016&oldid=30860"