Difference between revisions of "Tiso gene 11392"

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(Created page with "Category:Gene == Gene Tiso_gene_11163 == * left end position: ** 541 * transcription direction: ** POSITIVE * right end position: ** 2110 * centisome position: ** 6.776901...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] == * direction: ** REVERSIBLE * common name: ** rab_proteins_geranylgeranyltrans...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_11163 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] ==
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* left end position:
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* direction:
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** 541
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** rab_proteins_geranylgeranyltransferase_component_a_2
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* right end position:
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** protein_geranylgeranyltransferase_type_ii
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** 2110
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.5.1.60 EC-2.5.1.60]
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** 6.776901   
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** [http://enzyme.expasy.org/EC/2.5.1.59 EC-2.5.1.59]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[OROPRIBTRANS-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[PROT-CYS]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[S-GERANYLGERANYL-PROTEIN]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 geranylgeranyl diphosphate[c] '''+''' 1 a [protein]-L-cysteine[c] '''<=>''' 1 diphosphate[c] '''+''' 1 a [protein]-S-geranylgeranyl-L-cysteine[c]
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* [[PWY-7790]]
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* [[PWY-7791]]
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== Genes associated with this reaction  ==
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* [[PWY-5686]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_18628]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_18627]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_18785]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=541}}
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{{#set: direction=REVERSIBLE}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=rab_proteins_geranylgeranyltransferase_component_a_2}}
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{{#set: right end position=2110}}
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{{#set: common name=protein_geranylgeranyltransferase_type_ii}}
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{{#set: centisome position=6.776901    }}
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{{#set: ec number=EC-2.5.1.60}}
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{{#set: reaction associated=OROPRIBTRANS-RXN}}
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{{#set: ec number=EC-2.5.1.59}}
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{{#set: pathway associated=PWY-7790|PWY-7791|PWY-5686}}
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{{#set: gene associated=Tiso_gene_18628|Tiso_gene_18627|Tiso_gene_18785}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:52, 21 March 2018

Reaction RXN-3701

  • direction:
    • REVERSIBLE
  • common name:
    • rab_proteins_geranylgeranyltransferase_component_a_2
    • protein_geranylgeranyltransferase_type_ii
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11392&oldid=30879"