Difference between revisions of "PWY0-1586"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] ** [http://m...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] ==
 
* taxonomic range:
 
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
−
** 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
+
** TCA cycle I (prokaryotic)
 
* Synonym(s):
 
* Synonym(s):
 +
** tricarboxylic acid cycle
 +
** citric acid cycle
 +
** Krebs cycle
 +
** Szent-Gyorgyi-Krebs cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''3''' reactions found over '''7''' reactions in the full pathway
+
  '''7''' reactions found over '''10''' reactions in the full pathway
−
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
+
* [[ACONITATEDEHYDR-RXN]]
−
** 38 associated gene(s):
+
** 1 associated gene(s):
−
*** [[Tiso_gene_15988]]
+
*** [[Tiso_gene_13007]]
−
*** [[Tiso_gene_10760]]
+
−
*** [[Tiso_gene_2019]]
+
−
*** [[Tiso_gene_2747]]
+
−
*** [[Tiso_gene_10288]]
+
−
*** [[Tiso_gene_5713]]
+
−
*** [[Tiso_gene_1142]]
+
−
*** [[Tiso_gene_18343]]
+
−
*** [[Tiso_gene_13784]]
+
−
*** [[Tiso_gene_17467]]
+
−
*** [[Tiso_gene_8601]]
+
−
*** [[Tiso_gene_19075]]
+
−
*** [[Tiso_gene_4645]]
+
−
*** [[Tiso_gene_8599]]
+
−
*** [[Tiso_gene_6767]]
+
−
*** [[Tiso_gene_12514]]
+
−
*** [[Tiso_gene_2924]]
+
−
*** [[Tiso_gene_3667]]
+
−
*** [[Tiso_gene_1799]]
+
−
*** [[Tiso_gene_10158]]
+
−
*** [[Tiso_gene_4112]]
+
−
*** [[Tiso_gene_6144]]
+
−
*** [[Tiso_gene_16176]]
+
−
*** [[Tiso_gene_43]]
+
−
*** [[Tiso_gene_13729]]
+
−
*** [[Tiso_gene_15582]]
+
−
*** [[Tiso_gene_277]]
+
−
*** [[Tiso_gene_3314]]
+
−
*** [[Tiso_gene_16712]]
+
−
*** [[Tiso_gene_6277]]
+
−
*** [[Tiso_gene_8600]]
+
−
*** [[Tiso_gene_13604]]
+
−
*** [[Tiso_gene_17804]]
+
−
*** [[Tiso_gene_12636]]
+
−
*** [[Tiso_gene_13847]]
+
−
*** [[Tiso_gene_14428]]
+
−
*** [[Tiso_gene_11387]]
+
−
*** [[Tiso_gene_7067]]
+
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
−
*** [[orthology-athaliana]]
+
*** [[annotation-experimental_annotation]]
−
*** [[orthology-synechocystis]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[H2NEOPTERINALDOL-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_2577]]
+
−
*** [[Tiso_gene_2576]]
+
−
** 1 reconstruction source(s) associated:
+
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
* [[H2PTERIDINEPYROPHOSPHOKIN-RXN]]
+
*** [[orthology-synechocystis]]
 +
* [[ACONITATEHYDR-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_11659]]
+
*** [[Tiso_gene_13007]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[CITSYN-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18030]]
 +
*** [[Tiso_gene_9601]]
 +
*** [[Tiso_gene_9603]]
 +
*** [[Tiso_gene_9602]]
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_3691]]
 +
*** [[Tiso_gene_6720]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[ISOCITDEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_18262]]
 +
*** [[Tiso_gene_10809]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
 +
* [[MALATE-DEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
 +
*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_15846]]
 +
*** [[Tiso_gene_11866]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10063 RXN-10063]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12356 RXN-12356]
+
* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-ACCEPTOR-RXN MALATE-DEHYDROGENASE-ACCEPTOR-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12357 RXN-12357]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12358 RXN-12358]
+
 
== External links  ==
 
== External links  ==
 +
* ECOCYC:
 +
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TCA TCA]
 +
* ARACYC:
 +
** [http://metacyc.org/ARA/NEW-IMAGE?object=TCA TCA]
 +
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2157}}
 
{{#set: taxonomic range=TAX-2157}}
−
{{#set: common name=6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)}}
+
{{#set: common name=TCA cycle I (prokaryotic)}}
−
{{#set: reaction found=3}}
+
{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Krebs cycle|Szent-Gyorgyi-Krebs cycle}}
−
{{#set: total reaction=7}}
+
{{#set: reaction found=7}}
−
{{#set: completion rate=43.0}}
+
{{#set: total reaction=10}}
 +
{{#set: completion rate=70.0}}

Revision as of 14:52, 21 March 2018

Pathway TCA

  • taxonomic range:
  • common name:
    • TCA cycle I (prokaryotic)
  • Synonym(s):
    • tricarboxylic acid cycle
    • citric acid cycle
    • Krebs cycle
    • Szent-Gyorgyi-Krebs cycle

Reaction(s) found

7 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY0-1586&oldid=30897"