Difference between revisions of "Tiso gene 4175"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11065 RXN-11065] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-lactamase * ec number:...")
(Created page with "Category:Gene == Gene Tiso_gene_8826 == * right end position: ** 4194 * transcription direction: ** NEGATIVE * left end position: ** 25 * centisome position: ** 0.25385866...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11065 RXN-11065] ==
+
== Gene Tiso_gene_8826 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 4194
−
* common name:
+
* transcription direction:
−
** beta-lactamase
+
** NEGATIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
+
** 25
 +
* centisome position:
 +
** 0.25385866   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.6.4.1-RXN]]
−
** 3 [[WATER]][c] '''+''' 2 [[CPD-12259]][c] '''=>''' 1 [[UNDECAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12230]][c] '''+''' 4 [[D-ALANINE]][c]
+
−
* With common name(s):
+
−
** 3 H2O[c] '''+''' 2 a peptidoglycan dimer (S. aureus)[c] '''=>''' 1 di-trans,octa-cis-undecaprenyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 a peptidoglycan with D,D cross-link (S. aureus)[c] '''+''' 4 D-alanine[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_18870]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-5265]], peptidoglycan biosynthesis II (staphylococci): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5265 PWY-5265]
+
−
** '''3''' reactions found over '''10''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=4194}}
−
{{#set: common name=beta-lactamase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: ec number=EC-3.4.16.4}}
+
{{#set: left end position=25}}
−
{{#set: gene associated=Tiso_gene_18870}}
+
{{#set: centisome position=0.25385866    }}
−
{{#set: in pathway=PWY-5265}}
+
{{#set: reaction associated=3.6.4.1-RXN}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 14:52, 21 March 2018

Gene Tiso_gene_8826

  • right end position:
    • 4194
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 25
  • centisome position:
    • 0.25385866
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4175&oldid=30898"