Difference between revisions of "RXN-17024"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
(Created page with "Category:Gene == Gene Tiso_gene_4330 == * right end position: ** 14679 * transcription direction: ** NEGATIVE * left end position: ** 7246 * centisome position: ** 48.2198...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Gene]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] ==
+
== Gene Tiso_gene_4330 ==
−
* taxonomic range:
+
* right end position:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
+
** 14679
−
* common name:
+
* transcription direction:
−
** Rubisco shunt
+
** NEGATIVE
 +
* left end position:
 +
** 7246
 +
* centisome position:
 +
** 48.21987   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reactions associated ==
−
'''10''' reactions found over '''10''' reactions in the full pathway
+
* Reaction: [[ATPASE-RXN]]
−
* [[1TRANSKETO-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 2 associated gene(s):
+
*** Assignment: ec-number
−
*** [[Tiso_gene_5008]]
+
* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
*** [[Tiso_gene_11559]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 5 reconstruction source(s) associated:
+
*** Assignment: ec-number
−
*** [[annotation-experimental_annotation]]
+
* Reaction: [[RXN-12195]]
−
*** [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[annotation-in-silico_annotation]]
+
*** Assignment: ec-number
−
*** [[orthology-synechocystis]]
+
* Reaction: [[RXN-12196]]
−
*** [[manual-primary_network]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[2PGADEHYDRAT-RXN]]
+
*** Assignment: ec-number
−
** 4 associated gene(s):
+
* Reaction: [[RXN0-5462]]
−
*** [[Tiso_gene_14718]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_8720]]
+
*** Assignment: ec-number
−
*** [[Tiso_gene_5619]]
+
== Pathways associated ==
−
*** [[Tiso_gene_13317]]
+
* [[PWY-7184]]
−
** 7 reconstruction source(s) associated:
+
* [[PWY-7198]]
−
*** [[annotation-experimental_annotation]]
+
* [[PWY-6545]]
−
*** [[orthology-esiliculosus]]
+
* [[PWY-7210]]
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
* [[2TRANSKETO-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_11559]]
+
−
*** [[Tiso_gene_5008]]
+
−
** 5 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-creinhardtii]]
+
−
*** [[manual-primary_network]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
* [[3PGAREARR-RXN]]
+
−
** 16 associated gene(s):
+
−
*** [[Tiso_gene_2667]]
+
−
*** [[Tiso_gene_9922]]
+
−
*** [[Tiso_gene_15048]]
+
−
*** [[Tiso_gene_2841]]
+
−
*** [[Tiso_gene_14530]]
+
−
*** [[Tiso_gene_16754]]
+
−
*** [[Tiso_gene_2365]]
+
−
*** [[Tiso_gene_16271]]
+
−
*** [[Tiso_gene_5468]]
+
−
*** [[Tiso_gene_20311]]
+
−
*** [[Tiso_gene_14664]]
+
−
*** [[Tiso_gene_15391]]
+
−
*** [[Tiso_gene_14212]]
+
−
*** [[Tiso_gene_10516]]
+
−
*** [[Tiso_gene_9923]]
+
−
*** [[Tiso_gene_7201]]
+
−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
* [[PEPDEPHOS-RXN]]
+
−
** 4 associated gene(s):
+
−
*** [[Tiso_gene_14504]]
+
−
*** [[Tiso_gene_18206]]
+
−
*** [[Tiso_gene_974]]
+
−
*** [[Tiso_gene_14505]]
+
−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
* [[PHOSPHORIBULOKINASE-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_17637]]
+
−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
* [[RIB5PISOM-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_18217]]
+
−
** 5 reconstruction source(s) associated:
+
−
*** [[orthology-athaliana]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[manual-primary_network]]
+
−
* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_12199]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[RIBULP3EPIM-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Tiso_gene_4754]]
+
−
*** [[Tiso_gene_19140]]
+
−
*** [[Tiso_gene_10879]]
+
−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
* [[TRANSALDOL-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_17601]]
+
−
*** [[Tiso_gene_1831]]
+
−
** 6 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-58024}}
+
{{#set: right end position=14679}}
−
{{#set: common name=Rubisco shunt}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: reaction found=10}}
+
{{#set: left end position=7246}}
−
{{#set: total reaction=10}}
+
{{#set: centisome position=48.21987    }}
−
{{#set: completion rate=100.0}}
+
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
 +
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}

Revision as of 14:53, 21 March 2018

Gene Tiso_gene_4330

  • right end position:
    • 14679
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 7246
  • centisome position:
    • 48.21987
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17024&oldid=31043"