Difference between revisions of "RXN-17793"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16909 RXN-16909] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl_phosphate_synthet...")
(Created page with "Category:Gene == Gene Tiso_gene_3788 == * right end position: ** 15495 * transcription direction: ** POSITIVE * left end position: ** 13412 * centisome position: ** 83.621...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16909 RXN-16909] ==
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== Gene Tiso_gene_3788 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 15495
* common name:
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* transcription direction:
** carbamoyl_phosphate_synthetase
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** POSITIVE
** protein_pyr1-3
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* left end position:
 +
** 13412
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* centisome position:
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** 83.62118   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[GLYCINE--TRNA-LIGASE-RXN]]
** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[CPD-18238]][c] '''+''' 1 [[ADP]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 carboxyphosphate[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_4976]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4685]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4975]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7693]], guadinomine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7693 PWY-7693]
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** '''3''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
 +
== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=15495}}
{{#set: common name=carbamoyl_phosphate_synthetase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=protein_pyr1-3}}
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{{#set: left end position=13412}}
{{#set: gene associated=Tiso_gene_4976|Tiso_gene_4685|Tiso_gene_4975}}
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{{#set: centisome position=83.62118    }}
{{#set: in pathway=PWY-7693}}
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{{#set: reaction associated=GLYCINE--TRNA-LIGASE-RXN}}
{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:54, 21 March 2018

Gene Tiso_gene_3788

  • right end position:
    • 15495
  • transcription direction:
    • POSITIVE
  • left end position:
    • 13412
  • centisome position:
    • 83.62118
  • Synonym(s):

Reactions associated

Pathways associated

External links