Difference between revisions of "2-KETO-3-DEOXY-D-GLUCARATE"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16909 RXN-16909] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl_phosphate_synthet...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16909 RXN-16909] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** guanosine nucleotides degradation I
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** carbamoyl_phosphate_synthetase
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** protein_pyr1-3
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[RXN-7609]]
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** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[CPD-18238]][c] '''+''' 1 [[ADP]][c]
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** 8 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_14435]]
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** 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 carboxyphosphate[c] '''+''' 1 ADP[c]
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*** [[Tiso_gene_5911]]
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*** [[Tiso_gene_13929]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_6640]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_14246]]
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* Gene: [[Tiso_gene_4976]]
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*** [[Tiso_gene_14434]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_6988]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_9166]]
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* Gene: [[Tiso_gene_4685]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: EC-NUMBER
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* [[RXN0-363]]
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* Gene: [[Tiso_gene_4975]]
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** 2 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_11910]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_12995]]
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** Source: [[annotation-experimental_annotation]]
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** 1 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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== Pathways  ==
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* [[RXN0-901]]
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* [[PWY-7693]], guadinomine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7693 PWY-7693]
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** 1 associated gene(s):
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** '''3''' reactions found over '''12''' reactions in the full pathway
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*** [[Tiso_gene_11775]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== Reaction(s) not found ==
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** Source: [[annotation-experimental_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DEAMINASE-RXN GUANOSINE-DEAMINASE-RXN]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3193}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=guanosine nucleotides degradation I}}
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{{#set: common name=carbamoyl_phosphate_synthetase}}
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{{#set: reaction found=3}}
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{{#set: common name=protein_pyr1-3}}
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{{#set: total reaction=4}}
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{{#set: gene associated=Tiso_gene_4976|Tiso_gene_4685|Tiso_gene_4975}}
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{{#set: completion rate=75.0}}
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{{#set: in pathway=PWY-7693}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:54, 21 March 2018

Reaction RXN-16909

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • carbamoyl_phosphate_synthetase
    • protein_pyr1-3
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 hydrogencarbonate[c] => 1 carboxyphosphate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7693, guadinomine B biosynthesis: PWY-7693
    • 3 reactions found over 12 reactions in the full pathway

Reconstruction information

External links

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