Difference between revisions of "BETAINE-ALDEHYDE-HYDRATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15513 RXN-15513] == * direction: ** REVERSIBLE * common name: ** ORF ** plastid_phosphoglycerat...")
(Created page with "Category:Gene == Gene Tiso_gene_13738 == * right end position: ** 5999 * transcription direction: ** NEGATIVE * left end position: ** 3302 * centisome position: ** 53.9630...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15513 RXN-15513] ==
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== Gene Tiso_gene_13738 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 5999
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* common name:
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* transcription direction:
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** ORF
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** NEGATIVE
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** plastid_phosphoglycerate_mutase_protein
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* left end position:
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** phosphoglycerate_mutase
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** 3302
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** bisphosphoglycerate-dependent_phosphoglycerate_mutase
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* centisome position:
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* ec number:
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** 53.963066   
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** [http://enzyme.expasy.org/EC/5.4.2.11 EC-5.4.2.11]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADENOSINETRIPHOSPHATASE-RXN]]
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** 1 [[2-PG]][c] '''<=>''' 1 [[G3P]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[ATPASE-RXN]]
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** 1 2-phospho-D-glycerate[c] '''<=>''' 1 3-phospho-D-glycerate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7201]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9922]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2841]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14530]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9923]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16271]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2365]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14664]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-1622]], formaldehyde assimilation I (serine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
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** '''12''' reactions found over '''12''' reactions in the full pathway
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* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
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** '''11''' reactions found over '''11''' reactions in the full pathway
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''14''' reactions found over '''18''' reactions in the full pathway
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* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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*** Tool: [[pathwaytools]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-12195]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-12196]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-5462]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: right end position=5999}}
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{{#set: common name=ORF}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=plastid_phosphoglycerate_mutase_protein}}
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{{#set: left end position=3302}}
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{{#set: common name=phosphoglycerate_mutase}}
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{{#set: centisome position=53.963066    }}
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{{#set: common name=bisphosphoglycerate-dependent_phosphoglycerate_mutase}}
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{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: ec number=EC-5.4.2.11}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: gene associated=Tiso_gene_7201|Tiso_gene_9922|Tiso_gene_2841|Tiso_gene_14530|Tiso_gene_9923|Tiso_gene_16271|Tiso_gene_2365|Tiso_gene_14664}}
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{{#set: in pathway=PWY-1622|GLYCOLYSIS|ANAGLYCOLYSIS-PWY|PWY-5484|P122-PWY|PWY66-399}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:54, 21 March 2018

Gene Tiso_gene_13738

  • right end position:
    • 5999
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3302
  • centisome position:
    • 53.963066
  • Synonym(s):

Reactions associated

Pathways associated

External links

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