Difference between revisions of "RIBITOLUTIL-PWY"

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(Created page with "Category:Gene == Gene Tiso_gene_743 == * left end position: ** 18842 * transcription direction: ** NEGATIVE * right end position: ** 23716 * centisome position: ** 65.0621...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidopyrimidine-d...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_743 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] ==
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* left end position:
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* direction:
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** 18842
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** formamidopyrimidine-dna_glycosylase
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* right end position:
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** endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
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** 23716
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** n-glycosylase_dna_lyase
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* centisome position:
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* ec number:
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** 65.06216   
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** [http://enzyme.expasy.org/EC/3.2.2.23 EC-3.2.2.23]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[DNA-containing-diamino-hydro-formamidops]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DNA-containing-aPurinic-Sites]][c] '''+''' 1 [[CPD-16491]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[synechocystis]]
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** 1 a ring-opened 7-methylguanine in DNA[c] '''+''' 1 H2O[c] '''=>''' 1 an apurinic site within DNA[c] '''+''' 1 2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimidine[c]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Tiso_gene_16992]]
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* [[PWY-7219]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_1280]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_9068]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6558]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_14609]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=18842}}
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* UNIPROT:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/P44948 P44948]
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{{#set: right end position=23716}}
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** [http://www.uniprot.org/uniprot/P57014 P57014]
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{{#set: centisome position=65.06216    }}
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** [http://www.uniprot.org/uniprot/P05523 P05523]
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{{#set: reaction associated=ADENYLOSUCCINATE-SYNTHASE-RXN}}
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** [http://www.uniprot.org/uniprot/P19210 P19210]
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{{#set: pathway associated=PWY-7219}}
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** [http://www.uniprot.org/uniprot/P74290 P74290]
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** [http://www.uniprot.org/uniprot/O69470 O69470]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=formamidopyrimidine-dna_glycosylase}}
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{{#set: common name=endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b}}
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{{#set: common name=n-glycosylase_dna_lyase}}
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{{#set: ec number=EC-3.2.2.23}}
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{{#set: gene associated=Tiso_gene_16992|Tiso_gene_1280|Tiso_gene_9068|Tiso_gene_6558|Tiso_gene_14609}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:54, 21 March 2018

Reaction 3.2.2.23-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • formamidopyrimidine-dna_glycosylase
    • endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
    • n-glycosylase_dna_lyase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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