Difference between revisions of "Seminolipids"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Gene == Gene Tiso_gene_1831 == * right end position: ** 8417 * transcription direction: ** POSITIVE * left end position: ** 6588 * centisome position: ** 30.5878...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400] ==
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== Gene Tiso_gene_1831 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** 8417
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* transcription direction:
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* common name:
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** POSITIVE
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** L-arginine biosynthesis IV (archaebacteria)
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* left end position:
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** 6588
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* centisome position:
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** 30.5878   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''7''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[R08575]]
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* [[ARGSUCCINLYA-RXN]]
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** Source: [[orthology-synechocystis]]
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** 1 associated gene(s):
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* Reaction: [[TRANSALDOL-RXN]]
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*** [[Tiso_gene_2485]]
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** Source: [[annotation-in-silico_annotation]]
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** 7 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: ec-number
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
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*** [[orthology-athaliana]]
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** Source: [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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** Source: [[orthology-creinhardtii]]
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*** [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[ARGSUCCINSYN-RXN]]
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* [[PWY-5723]]
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** 1 associated gene(s):
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* [[P185-PWY]]
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*** [[Tiso_gene_12592]]
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* [[P124-PWY]]
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** 7 reconstruction source(s) associated:
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* [[PWY-1861]]
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*** [[annotation-experimental_annotation]]
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* [[NONOXIPENT-PWY]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[CARBPSYN-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_4976]]
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*** [[Tiso_gene_4975]]
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*** [[Tiso_gene_4685]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ORNCARBAMTRANSFER-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18444]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN-15005]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13144]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-15006]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6700]]
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*** [[Tiso_gene_8102]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-15007]]
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** 1 associated gene(s):
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*** [[Tiso_gene_11231]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15003 RXN-15003]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15004 RXN-15004]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2157}}
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{{#set: right end position=8417}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=L-arginine biosynthesis IV (archaebacteria)}}
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{{#set: left end position=6588}}
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{{#set: reaction found=7}}
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{{#set: centisome position=30.5878    }}
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{{#set: total reaction=9}}
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{{#set: reaction associated=R08575|TRANSALDOL-RXN}}
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{{#set: completion rate=78.0}}
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{{#set: pathway associated=PWY-5723|P185-PWY|P124-PWY|PWY-1861|NONOXIPENT-PWY}}

Revision as of 15:55, 21 March 2018

Gene Tiso_gene_1831

  • right end position:
    • 8417
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6588
  • centisome position:
    • 30.5878
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Seminolipids&oldid=31179"