Difference between revisions of "PWY-6287"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7375 PWY-7375] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-10239 TAX-1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7375 PWY-7375] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-10239 TAX-10239]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://enzyme.expasy.org/EC/3.1.2.2 EC-3.1.2.2]
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* common name:
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** mRNA capping I
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN]]
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** 1 [[STEAROYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[STEARIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_5135]]
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** 1 stearoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 stearate[c] '''+''' 1 H+[c] '''+''' 1 coenzyme A[c]
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*** [[Tiso_gene_2105]]
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*** [[Tiso_gene_5134]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_7477]]
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* [[MRNA-GUANYLYLTRANSFERASE-RXN]]
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** Source: [[orthology-athaliana]]
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** 3 associated gene(s):
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* Gene: [[Tiso_gene_801]]
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*** [[Tiso_gene_7172]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_7173]]
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== Pathways  ==
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*** [[Tiso_gene_2229]]
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* [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972]
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** 2 reconstruction source(s) associated:
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** '''4''' reactions found over '''6''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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*** [[orthology-esiliculosus]]
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** '''8''' reactions found over '''18''' reactions in the full pathway
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== Reaction(s) not found ==
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* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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* [http://metacyc.org/META/NEW-IMAGE?object=POLYNUCLEOTIDE-5-PHOSPHATASE-RXN POLYNUCLEOTIDE-5-PHOSPHATASE-RXN]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-10239}}
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* RHEA:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30139 30139]
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{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
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{{#set: common name=mRNA capping I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08174 R08174]
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{{#set: reaction found=2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=3}}
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{{#set: ec number=EC-3.1.2.2}}
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{{#set: completion rate=67.0}}
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{{#set: gene associated=Tiso_gene_7477|Tiso_gene_801}}
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{{#set: in pathway=PWY-5972|PWY-6733|PWY3O-355}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:55, 21 March 2018

Reaction RXN-9624

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5972, stearate biosynthesis I (animals and fungi): PWY-5972
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 8 reactions found over 18 reactions in the full pathway
  • PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6287&oldid=31224"