Difference between revisions of "PYRIDOXAL"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO2-LIPID-IVA KDO2-LIPID-IVA] == * smiles: ** CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO2-LIPID-IVA KDO2-LIPID-IVA] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O)C(OC(CC(O)CCCCCCCCCCC)=O)1)COC2(C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(C(O2)COC4(C([O-])=O)(O[CH](C(CO)O)C(O)C(OC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C3))C4))OP([O-])([O-])=O))
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/3.1.2.2 EC-3.1.2.2]
+
** α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA
 +
* inchi key:
 +
** InChIKey=XAOLJGCZESYRFT-RAINXGQXSA-H
 +
* molecular weight:
 +
** 1840.032   
 
* Synonym(s):
 
* Synonym(s):
 +
** (Kdo)2-lipid IVA
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[STEAROYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[STEARIC_ACID]][c] '''+''' 1 [[PROTON]][c]
+
* [[KDOTRANS2-RXN]]
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 stearoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 coenzyme A[c] '''+''' 1 stearate[c] '''+''' 1 H+[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_7477]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_801]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
== Pathways  ==
+
−
* [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
+
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
−
* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PUBCHEM:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30139 30139]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91820576 91820576]
−
* LIGAND-RXN:
+
* CHEBI:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08174 R08174]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60365 60365]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* BIGG : kdo2lipid4
−
{{#set: ec number=EC-3.1.2.2}}
+
* LIGAND-CPD:
−
{{#set: gene associated=Tiso_gene_7477|Tiso_gene_801}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C06025 C06025]
−
{{#set: in pathway=PWY-5972|PWY-6733|PWY3O-355}}
+
{{#set: smiles=CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O)C(OC(CC(O)CCCCCCCCCCC)=O)1)COC2(C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(C(O2)COC4(C([O-])=O)(O[CH](C(CO)O)C(O)C(OC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C3))C4))OP([O-])([O-])=O))}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: common name=α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|orthology-creinhardtii}}
+
{{#set: inchi key=InChIKey=XAOLJGCZESYRFT-RAINXGQXSA-H}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: molecular weight=1840.032    }}
 +
{{#set: common name=(Kdo)2-lipid IVA}}
 +
{{#set: produced by=KDOTRANS2-RXN}}

Revision as of 14:55, 21 March 2018

Metabolite KDO2-LIPID-IVA

  • smiles:
    • CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O)C(OC(CC(O)CCCCCCCCCCC)=O)1)COC2(C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(C(O2)COC4(C([O-])=O)(O[CH](C(CO)O)C(O)C(OC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C3))C4))OP([O-])([O-])=O))
  • common name:
    • α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA
  • inchi key:
    • InChIKey=XAOLJGCZESYRFT-RAINXGQXSA-H
  • molecular weight:
    • 1840.032
  • Synonym(s):
    • (Kdo)2-lipid IVA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O)C(OC(CC(O)CCCCCCCCCCC)=O)1)COC2(C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(C(O2)COC4(C([O-])=O)(O[CH](C(CO)O)C(O)C(OC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C3))C4))OP([O-])([O-])=O))" cannot be used as a page name in this wiki.
"α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PYRIDOXAL&oldid=31229"