Difference between revisions of "RXN-16025"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=2PHENDEG-PWY 2PHENDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-332...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTOCHROME-C-PEROXIDASE-RXN CYTOCHROME-C-PEROXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=2PHENDEG-PWY 2PHENDEG-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTOCHROME-C-PEROXIDASE-RXN CYTOCHROME-C-PEROXIDASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** phenylethylamine degradation I
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** ascorbate_peroxidase
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** cytochrome-c_peroxidase
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** peroxidase
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.11.1.5 EC-1.11.1.5]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[AMINEPHEN-RXN]]
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** 2 [[PROTON]][c] '''+''' 2 [[Cytochromes-C-Reduced]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[Cytochromes-C-Oxidized]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_8756]]
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** 2 H+[c] '''+''' 2 a reduced c-type cytochrome[c] '''+''' 1 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 2 an oxidized c-type cytochrome[c]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PHENDEHYD-RXN]]
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* Gene: [[Tiso_gene_5435]]
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** 0 associated gene:
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** Source: [[annotation-in-silico_annotation]]
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** 1 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_19683]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11606]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4990]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4992]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11607]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=2PHENDEG-PWY 2PHENDEG-PWY]
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** [http://www.genome.jp/dbget-bin/www_bget?R00017 R00017]
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{{#set: taxonomic range=TAX-33208}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P55929 P55929]
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{{#set: common name=phenylethylamine degradation I}}
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** [http://www.uniprot.org/uniprot/O66533 O66533]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/Q9RYL1 Q9RYL1]
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{{#set: total reaction=2}}
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** [http://www.uniprot.org/uniprot/Q9KVQ2 Q9KVQ2]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q9ZJF8 Q9ZJF8]
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** [http://www.uniprot.org/uniprot/O25997 O25997]
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** [http://www.uniprot.org/uniprot/Q9PIE3 Q9PIE3]
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** [http://www.uniprot.org/uniprot/Q9PJ91 Q9PJ91]
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** [http://www.uniprot.org/uniprot/Q8X5N0 Q8X5N0]
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** [http://www.uniprot.org/uniprot/P14532 P14532]
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** [http://www.uniprot.org/uniprot/P00431 P00431]
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** [http://www.uniprot.org/uniprot/P37197 P37197]
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** [http://www.uniprot.org/uniprot/Q51658 Q51658]
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** [http://www.uniprot.org/uniprot/Q50233 Q50233]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ascorbate_peroxidase}}
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{{#set: common name=cytochrome-c_peroxidase}}
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{{#set: common name=peroxidase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.11.1.5}}
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{{#set: gene associated=Tiso_gene_5435|Tiso_gene_19683|Tiso_gene_11606|Tiso_gene_4990|Tiso_gene_4992|Tiso_gene_11607}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:56, 21 March 2018

Reaction CYTOCHROME-C-PEROXIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ascorbate_peroxidase
    • cytochrome-c_peroxidase
    • peroxidase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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