Difference between revisions of "RXN-10660"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10038 RXN-10038] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.7...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10038 RXN-10038] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-241806]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://enzyme.expasy.org/EC/2.7.1.164 EC-2.7.1.164]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3312 TAX-3312]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3208 TAX-3208]
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* common name:
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** 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
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* Synonym(s):
 
* Synonym(s):
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** light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''8''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[PROTOPORGENOXI-RXN]]
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** 1 [[L-seryl-SEC-tRNAs]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[O-phospho-L-seryl-tRNASecs]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_11986]]
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** 1 an L-seryl-[tRNAsec][c] '''+''' 1 ATP[c] '''<=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 an O-phospho-L-seryl-[tRNASec][c]
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*** [[Tiso_gene_15401]]
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** 6 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
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*** [[annotation-in-silico_annotation]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** [[orthology-athaliana]]
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== Reconstruction information  ==
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*** [[orthology-synechocystis]]
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* Category: [[annotation]]
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*** [[manual-primary_network]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-5282]]
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*** Tool: [[pathwaytools]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[RXN-5283]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[RXN-5284]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_19451]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RXN0-1461]]
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** 5 associated gene(s):
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*** [[Tiso_gene_2247]]
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*** [[Tiso_gene_2246]]
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*** [[Tiso_gene_13364]]
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*** [[Tiso_gene_13365]]
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*** [[Tiso_gene_3671]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN1F-20]]
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** 3 associated gene(s):
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*** [[Tiso_gene_9870]]
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*** [[Tiso_gene_11960]]
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*** [[Tiso_gene_5993]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[UROGENDECARBOX-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18743]]
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*** [[Tiso_gene_19684]]
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*** [[Tiso_gene_18744]]
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*** [[Tiso_gene_5173]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17485 RXN-17485]
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== External links  ==
 
== External links  ==
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* PLANTCYC : PWY-7159
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-241806}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08223 R08223]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: ec number=EC-2.7.1.164}}
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{{#set: taxonomic range=TAX-3041}}
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{{#set: in pathway=PWY-6281}}
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{{#set: taxonomic range=TAX-3312}}
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{{#set: reconstruction category=annotation}}
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{{#set: taxonomic range=TAX-3208}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis}}
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{{#set: reaction found=8}}
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{{#set: total reaction=9}}
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{{#set: completion rate=89.0}}
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Revision as of 15:57, 21 March 2018

Reaction RXN-10038

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes): PWY-6281
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10660&oldid=31405"