Difference between revisions of "S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7033 PWY-7033] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7033 PWY-7033] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** alkane biosynthesis II
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** retinyl-palmitate esterase
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** ORF
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** serine_esterase
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** sialate_o-acetylesterase-like_protein
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** lysophospholipase
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** alpha_beta_hydrolase
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** alpha_beta_hydrolase_fold_protein
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** protein_chloroplastic
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** para-nitrobenzyl_esterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** retinyl palmitate hydrolase
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** retinyl palmitate hydrolyase
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** retinyl ester hydrolase
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[RXN-7904]]
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** 1 [[CHOCOLA_A]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Retinols]][c]
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** 9 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_7855]]
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** 1 all-trans-retinyl palmitate[c] '''+''' 1 H2O[c] '''=>''' 1 palmitate[c] '''+''' 1 H+[c] '''+''' 1 a retinol[c]
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*** [[Tiso_gene_4191]]
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*** [[Tiso_gene_10876]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_348]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_500]]
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* Gene: [[Tiso_gene_4650]]
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*** [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_9394]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_136]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_135]]
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* Gene: [[Tiso_gene_10066]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_4606]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13273 RXN-13273]
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* Gene: [[Tiso_gene_1538]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13281 RXN-13281]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_19778]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11351]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_1922]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_9429]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_2556]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_12686]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_16518]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_1537]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_17029]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* RHEA:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21508 21508]
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{{#set: common name=alkane biosynthesis II}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=1}}
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{{#set: common name=retinyl-palmitate esterase}}
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{{#set: total reaction=3}}
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{{#set: common name=ORF}}
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{{#set: completion rate=33.0}}
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{{#set: common name=serine_esterase}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: common name=lysophospholipase}}
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: common name=para-nitrobenzyl_esterase}}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: common name=retinyl palmitate hydrolase|retinyl palmitate hydrolyase|retinyl ester hydrolase}}
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{{#set: gene associated=Tiso_gene_4650|Tiso_gene_10066|Tiso_gene_4606|Tiso_gene_1538|Tiso_gene_19778|Tiso_gene_11351|Tiso_gene_1922|Tiso_gene_9429|Tiso_gene_2556|Tiso_gene_12686|Tiso_gene_16518|Tiso_gene_1537|Tiso_gene_17029}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:57, 21 March 2018

Reaction RETINYL-PALMITATE-ESTERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • retinyl-palmitate esterase
    • ORF
    • serine_esterase
    • sialate_o-acetylesterase-like_protein
    • lysophospholipase
    • alpha_beta_hydrolase
    • alpha_beta_hydrolase_fold_protein
    • protein_chloroplastic
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):
    • retinyl palmitate hydrolase
    • retinyl palmitate hydrolyase
    • retinyl ester hydrolase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-retinyl palmitate[c] + 1 H2O[c] => 1 palmitate[c] + 1 H+[c] + 1 a retinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links









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