Difference between revisions of "NAD-BIOSYNTHESIS-III"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.102-RXN 3.4.21.102-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** phosp...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.102-RXN 3.4.21.102-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** ORF
 +
** phosphoserine_aminotransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.21.102 EC-3.4.21.102]
+
** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
+
** 1 [[GLT]][c] '''+''' 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''<=>''' 1 [[4-PHOSPHONOOXY-THREONINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a protein[c] '''+''' 1 H2O[c] '''=>''' 1 a peptide[c]
+
** 1 L-glutamate[c] '''+''' 1 (3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate[c] '''<=>''' 1 4-phospho-hydroxy-L-threonine[c] '''+''' 1 2-oxoglutarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14917]]
+
* Gene: [[Tiso_gene_17123]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15686]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: ec number=EC-3.4.21.102}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16573 16573]
−
{{#set: gene associated=Tiso_gene_14917}}
+
* LIGAND-RXN:
−
{{#set: in pathway=}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
−
{{#set: reconstruction category=orthology}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: common name=ORF}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=phosphoserine_aminotransferase}}
 +
{{#set: ec number=EC-2.6.1.52}}
 +
{{#set: gene associated=Tiso_gene_17123|Tiso_gene_15686}}
 +
{{#set: in pathway=PYRIDOXSYN-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:57, 21 March 2018

Reaction PSERTRANSAMPYR-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
    • phosphoserine_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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