Difference between revisions of "IS30-Insertion-Sequences"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACHMSSELCYSLh ACHMSSELCYSLh] == * direction: ** LEFT-TO-RIGHT * common name: ** O-Acetylhomoserine...")
(Created page with "Category:Gene == Gene Tiso_gene_14141 == * right end position: ** 1959 * transcription direction: ** POSITIVE * left end position: ** 1300 * centisome position: ** 22.3713...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACHMSSELCYSLh ACHMSSELCYSLh] ==
+
== Gene Tiso_gene_14141 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 1959
−
* common name:
+
* transcription direction:
−
** O-Acetylhomoserine succinate-lyase (adding cysteine), chloroplast
+
** POSITIVE
 +
* left end position:
 +
** 1300
 +
* centisome position:
 +
** 22.371365   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN-10606]]
−
** 1.0 [[L-SELENOCYSTEINE]][h] '''+''' 1.0 [[CPD-667]][h] '''=>''' 1.0 [[CPD-13717]][h] '''+''' 1.0 [[ACET]][h]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1.0 L-selenocysteine[h] '''+''' 1.0 O-acetyl-L-homoserine[h] '''=>''' 1.0 L-selenocystathionine[h] '''+''' 1.0 acetate[h]
+
* Reaction: [[RXN-10607]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-10608]]
−
* [[Tiso_gene_3732]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: ec-number
−
== Pathways  ==
+
* Reaction: [[RXN-10609]]
−
== Reconstruction information  ==
+
** Source: [[annotation-in-silico_annotation]]
−
* Category: [[orthology]]
+
*** Assignment: ec-number
−
** Source: [[orthology-creinhardtii]]
+
* Reaction: [[RXN-10616]]
−
*** Tool: [[pantograph]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-10617]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-10618]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-10619]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-10784]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-11060]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-13607]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-13608]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-14361]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9000]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN66-162]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN66-168]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN66-83]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[UDP-GLUCURONOSYLTRANSFERASE-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-6261]]
 +
* [[PWY66-201]]
 +
* [[PWY-5756]]
 +
* [[PWY-6398]]
 +
* [[PWY-6313]]
 +
* [[PWY66-221]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=1959}}
−
{{#set: common name=O-Acetylhomoserine succinate-lyase (adding cysteine), chloroplast}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: gene associated=Tiso_gene_3732}}
+
{{#set: left end position=1300}}
−
{{#set: in pathway=}}
+
{{#set: centisome position=22.371365    }}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reaction associated=RXN-10606|RXN-10607|RXN-10608|RXN-10609|RXN-10616|RXN-10617|RXN-10618|RXN-10619|RXN-10784|RXN-11060|RXN-13607|RXN-13608|RXN-14361|RXN-9000|RXN66-162|RXN66-168|RXN66-83|UDP-GLUCURONOSYLTRANSFERASE-RXN}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: pathway associated=PWY-6261|PWY66-201|PWY-5756|PWY-6398|PWY-6313|PWY66-221}}
−
{{#set: reconstruction tool=pantograph}}
+

Revision as of 15:57, 21 March 2018

Gene Tiso_gene_14141

  • right end position:
    • 1959
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1300
  • centisome position:
    • 22.371365
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=IS30-Insertion-Sequences&oldid=31485"