Difference between revisions of "RXN-12540"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11481 RXN-11481] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier...")
(Created page with "Category:Gene == Gene Tiso_gene_567 == * right end position: ** 14178 * transcription direction: ** POSITIVE * left end position: ** 12224 * centisome position: ** 38.8458...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11481 RXN-11481] ==
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== Gene Tiso_gene_567 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 14178
* common name:
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* transcription direction:
** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
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** POSITIVE
* ec number:
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* left end position:
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 12224
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* centisome position:
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** 38.84581   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[ATPASE-RXN]]
** 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Enoylpimeloyl-ACP-methyl-esters]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: ec-number
** 1 a (3R)-3-hydroxypimeloyl-[acp] methyl ester[c] '''=>''' 1 H2O[c] '''+''' 1 an enoylpimeloyl-[acp] methyl ester[c]
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== Pathways associated ==
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6884]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6885]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=14178}}
{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: ec number=EC-4.2.1.59}}
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{{#set: left end position=12224}}
{{#set: gene associated=Tiso_gene_6884|Tiso_gene_6885}}
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{{#set: centisome position=38.84581    }}
{{#set: in pathway=PWY-6519}}
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{{#set: reaction associated=ATPASE-RXN}}
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:58, 21 March 2018

Gene Tiso_gene_567

  • right end position:
    • 14178
  • transcription direction:
    • POSITIVE
  • left end position:
    • 12224
  • centisome position:
    • 38.84581
  • Synonym(s):

Reactions associated

Pathways associated

External links