Difference between revisions of "Tiso gene 8413"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] == * direction: ** L...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCLTD GLYCLTD] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerate dehydrogenase * Synon...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCLTD GLYCLTD] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** peptide-aspartate_beta-dioxygenase
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** Glycerate dehydrogenase
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** aspartyl_asparaginyl_beta-hydroxylase
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−
** aspartyl_asparaginylbeta-hydroxylase
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−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.14.11.16 EC-1.14.11.16]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[Protein-L-Aspartates]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** 1.0 [[GLYOX]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[NADH]][c] '''=>''' 1.0 [[GLYCOLLATE]][c] '''+''' 1.0 [[NAD]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-oxoglutarate[c] '''+''' 1 a [protein]-L-aspartate[c] '''+''' 1 oxygen[c] '''=>''' 1 a [protein]-3-hydroxy-L-aspartate[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
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** 1.0 glyoxylate[c] '''+''' 1.0 H+[c] '''+''' 1.0 NADH[c] '''=>''' 1.0 glycolate[c] '''+''' 1.0 NAD+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7631]]
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* Gene: [[Tiso_gene_777]]
−
** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_18904]]
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* [[Tiso_gene_19054]]
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** Source: [[orthology-creinhardtii]]
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_91]]
−
* [[Tiso_gene_17313]]
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** Source: [[orthology-creinhardtii]]
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** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10501]]
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−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17769]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_19156]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16225]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_7632]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q28056 Q28056]
 
−
** [http://www.uniprot.org/uniprot/Q93178 Q93178]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=peptide-aspartate_beta-dioxygenase}}
+
{{#set: common name=Glycerate dehydrogenase}}
−
{{#set: common name=aspartyl_asparaginyl_beta-hydroxylase}}
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{{#set: gene associated=Tiso_gene_777|Tiso_gene_18904|Tiso_gene_91}}
−
{{#set: common name=aspartyl_asparaginylbeta-hydroxylase}}
+
−
{{#set: ec number=EC-1.14.11.16}}
+
−
{{#set: gene associated=Tiso_gene_7631|Tiso_gene_19054|Tiso_gene_17313|Tiso_gene_10501|Tiso_gene_17769|Tiso_gene_19156|Tiso_gene_16225|Tiso_gene_7632}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}

Revision as of 15:00, 21 March 2018

Reaction GLYCLTD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycerate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 glyoxylate[c] + 1.0 H+[c] + 1.0 NADH[c] => 1.0 glycolate[c] + 1.0 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8413&oldid=31746"