Difference between revisions of "Tiso gene 2851"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111] ==
 
* taxonomic range:
 
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
 
* common name:
 
* common name:
** folate transformations I
+
** pyruvate fermentation to isobutanol (engineered)
 
* Synonym(s):
 
* Synonym(s):
 +
** isobutanol biosynthesis
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''7''' reactions found over '''12''' reactions in the full pathway
+
  '''4''' reactions found over '''5''' reactions in the full pathway
* [[1.5.1.20-RXN]]
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* [[ACETOLACTREDUCTOISOM-RXN]]
** 2 associated gene(s):
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** 1 associated gene(s):
*** [[Tiso_gene_14582]]
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*** [[Tiso_gene_10173]]
*** [[Tiso_gene_16954]]
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** 3 reconstruction source(s) associated:
** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[FORMATETHFLIG-RXN]]
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** 2 associated gene(s):
+
*** [[Tiso_gene_432]]
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*** [[Tiso_gene_7582]]
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** 4 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
* [[GLYOHMETRANS-RXN]]
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* [[ACETOLACTSYN-RXN]]
** 4 associated gene(s):
+
** 1 associated gene(s):
*** [[Tiso_gene_16153]]
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*** [[Tiso_gene_11362]]
*** [[Tiso_gene_16154]]
+
** 2 reconstruction source(s) associated:
*** [[Tiso_gene_18652]]
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*** [[Tiso_gene_7776]]
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** 4 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
*** [[orthology-esiliculosus]]
+
* [[DIHYDROXYISOVALDEHYDRAT-RXN]]
* [[HOMOCYSMETB12-RXN]]
+
 
** 1 associated gene(s):
 
** 1 associated gene(s):
*** [[Tiso_gene_1602]]
+
*** [[Tiso_gene_1563]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-athaliana]]
 +
*** [[annotation-experimental_annotation]]
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
*** [[annotation-experimental_annotation]]
 
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
* [[METHENYLTHFCYCLOHYDRO-RXN]]
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* [[RXN-7657]]
** 0 associated gene:
+
** 5 associated gene(s):
 +
*** [[Tiso_gene_6562]]
 +
*** [[Tiso_gene_5425]]
 +
*** [[Tiso_gene_7649]]
 +
*** [[Tiso_gene_6563]]
 +
*** [[Tiso_gene_5424]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
*** [[manual-primary_network]]
 
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
 
** 2 associated gene(s):
 
*** [[Tiso_gene_432]]
 
*** [[Tiso_gene_6004]]
 
** 3 reconstruction source(s) associated:
 
*** [[manual-primary_network]]
 
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
*** [[orthology-esiliculosus]]
 
* [[RXN-5061]]
 
** 1 associated gene(s):
 
*** [[Tiso_gene_4806]]
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
* [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.15-RXN 1.5.1.15-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7643 RXN-7643]
* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.19-RXN 2.1.1.19-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=5-FORMYL-THF-CYCLO-LIGASE-RXN 5-FORMYL-THF-CYCLO-LIGASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=GCVMULTI-RXN GCVMULTI-RXN]
+
 
== External links  ==
 
== External links  ==
 +
{{#set: taxonomic range=TAX-2157}}
 
{{#set: taxonomic range=TAX-2759}}
 
{{#set: taxonomic range=TAX-2759}}
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
{{#set: taxonomic range=TAX-2157}}
+
{{#set: common name=pyruvate fermentation to isobutanol (engineered)}}
{{#set: common name=folate transformations I}}
+
{{#set: common name=isobutanol biosynthesis}}
{{#set: reaction found=7}}
+
{{#set: reaction found=4}}
{{#set: total reaction=12}}
+
{{#set: total reaction=5}}
{{#set: completion rate=58.0}}
+
{{#set: completion rate=80.0}}

Revision as of 15:01, 21 March 2018

Pathway PWY-7111

  • taxonomic range:
  • common name:
    • pyruvate fermentation to isobutanol (engineered)
  • Synonym(s):
    • isobutanol biosynthesis

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links