Difference between revisions of "CPD-10139"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Gene == Gene Tiso_gene_2851 == * right end position: ** 18195 * transcription direction: ** POSITIVE * left end position: ** 17117 * centisome position: ** 93.617...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321] ==
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== Gene Tiso_gene_2851 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** 18195
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* common name:
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* transcription direction:
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** L-glutamate degradation IV
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** POSITIVE
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* left end position:
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** 17117
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* centisome position:
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** 93.61737   
 
* Synonym(s):
 
* Synonym(s):
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** GABA shunt
 
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** 4-aminobutyrate shunt
 
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** γ-aminobutyrate shunt
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''4''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[INORGPYROPHOSPHAT-RXN]]
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* [[GABATRANSAM-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_11231]]
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: ec-number
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* [[GLUTDECARBOX-RXN]]
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== Pathways associated ==
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** 2 associated gene(s):
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* [[PWY-7805]]
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*** [[Tiso_gene_10395]]
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* [[PWY-7807]]
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*** [[Tiso_gene_9927]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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* [[RXN-6903]]
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** 2 associated gene(s):
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*** [[Tiso_gene_777]]
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*** [[Tiso_gene_91]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_777]]
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*** [[Tiso_gene_91]]
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*** [[Tiso_gene_6952]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6902 RXN-6902]
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== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: right end position=18195}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-4321 PWY-4321]
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: left end position=17117}}
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{{#set: common name=L-glutamate degradation IV}}
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{{#set: centisome position=93.61737    }}
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{{#set: common name=GABA shunt|4-aminobutyrate shunt|γ-aminobutyrate shunt}}
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{{#set: reaction associated=INORGPYROPHOSPHAT-RXN|TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: reaction found=4}}
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{{#set: pathway associated=PWY-7805|PWY-7807}}
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{{#set: total reaction=5}}
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{{#set: completion rate=80.0}}
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Revision as of 16:01, 21 March 2018

Gene Tiso_gene_2851

  • right end position:
    • 18195
  • transcription direction:
    • POSITIVE
  • left end position:
    • 17117
  • centisome position:
    • 93.61737
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-10139&oldid=31820"