Difference between revisions of "Purine-Bases"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-305 RXN66-305] == * direction: ** LEFT-TO-RIGHT * common name: ** 14-oxolanosterol deformylas...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-305 RXN66-305] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** 14-oxolanosterol deformylase
+
** L-arginine biosynthesis III (via N-acetyl-L-citrulline)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''7''' reactions found over '''9''' reactions in the full pathway
−
** 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-4573]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[44-DIMETHYL-CHOLESTA-812-24-TRIENOL]][c] '''+''' 1 [[FORMATE]][c]
+
* [[ACETYLGLUTKIN-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 NADPH[c] '''+''' 1 oxygen[c] '''+''' 1 14-oxolanosterol[c] '''=>''' 1 NADP+[c] '''+''' 1 H2O[c] '''+''' 1 4,4-dimethyl-cholesta-8,12,24-trienol[c] '''+''' 1 formate[c]
+
*** [[Tiso_gene_13144]]
−
 
+
** 5 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-in-silico_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-athaliana]]
−
* [[Tiso_gene_8263]]
+
*** [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-synechocystis]]
−
== Pathways  ==
+
*** [[orthology-esiliculosus]]
−
* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
+
* [[ACETYLORNTRANSAM-RXN]]
−
** '''8''' reactions found over '''22''' reactions in the full pathway
+
** 1 associated gene(s):
−
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
+
*** [[Tiso_gene_11231]]
−
** '''7''' reactions found over '''22''' reactions in the full pathway
+
** 4 reconstruction source(s) associated:
−
== Reconstruction information  ==
+
*** [[annotation-in-silico_annotation]]
−
* Category: [[orthology]]
+
*** [[orthology-creinhardtii]]
−
** Source: [[orthology-esiliculosus]]
+
*** [[orthology-synechocystis]]
−
*** Tool: [[pantograph]]
+
*** [[orthology-esiliculosus]]
 +
* [[ARGSUCCINLYA-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_2485]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[ARGSUCCINSYN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_12592]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[CARBPSYN-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_4976]]
 +
*** [[Tiso_gene_4975]]
 +
*** [[Tiso_gene_4685]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[N-ACETYLGLUTPREDUCT-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_8102]]
 +
*** [[Tiso_gene_6700]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[N-ACETYLTRANSFER-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_11663]]
 +
*** [[Tiso_gene_5365]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2.1.3.9-RXN 2.1.3.9-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7933 RXN-7933]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=14-oxolanosterol deformylase}}
+
{{#set: common name=L-arginine biosynthesis III (via N-acetyl-L-citrulline)}}
−
{{#set: gene associated=Tiso_gene_8263}}
+
{{#set: reaction found=7}}
−
{{#set: in pathway=PWY66-341|PWY66-4}}
+
{{#set: total reaction=9}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: completion rate=78.0}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Revision as of 15:01, 21 March 2018

Pathway PWY-5154

  • taxonomic range:
  • common name:
    • L-arginine biosynthesis III (via N-acetyl-L-citrulline)
  • Synonym(s):

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Purine-Bases&oldid=31826"