Difference between revisions of "CPD-7419"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHHB-METHYLTRANSFER-RXN DHHB-METHYLTRANSFER-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7736 PWY-7736] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHHB-METHYLTRANSFER-RXN DHHB-METHYLTRANSFER-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7736 PWY-7736] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
−
** 3-demethylubiquinone-9_3-methyltransferase
+
** stellatic acid biosynthesis
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.1.1.64 EC-2.1.1.64]
+
 
* Synonym(s):
 
* Synonym(s):
−
** 5-demethylubiquinone-8 methyltransferase
 
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''8''' reactions in the full pathway
−
** 1 [[OCTAPRENYL-METHYL-OH-METHOXY-BENZQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-9956]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
* [[FARNESYLTRANSTRANSFERASE-RXN]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1 3-demethylubiquinol-8[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 ubiquinol-8[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
*** [[Tiso_gene_7305]]
−
 
+
*** [[Tiso_gene_16284]]
−
== Genes associated with this reaction  ==
+
** 6 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-experimental_annotation]]
−
* [[Tiso_gene_6943]]
+
*** [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
*** [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** [[orthology-athaliana]]
−
== Pathways  ==
+
*** [[orthology-synechocystis]]
−
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
+
*** [[manual-primary_network]]
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
* [[FPPSYN-RXN]]
−
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
+
** 1 associated gene(s):
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
*** [[Tiso_gene_16284]]
−
== Reconstruction information  ==
+
** 4 reconstruction source(s) associated:
−
* Category: [[annotation]]
+
*** [[orthology-athaliana]]
−
** Source: [[annotation-in-silico_annotation]]
+
*** [[orthology-synechocystis]]
−
*** Tool: [[pathwaytools]]
+
*** [[orthology-esiliculosus]]
 +
*** [[manual-primary_network]]
 +
* [[GPPSYN-RXN]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_19542]]
 +
*** [[Tiso_gene_18201]]
 +
*** [[Tiso_gene_16284]]
 +
*** [[Tiso_gene_2848]]
 +
*** [[Tiso_gene_1035]]
 +
*** [[Tiso_gene_4719]]
 +
*** [[Tiso_gene_11582]]
 +
*** [[Tiso_gene_13582]]
 +
*** [[Tiso_gene_10317]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[manual-primary_network]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17161 RXN-17161]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17162 RXN-17162]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17163 RXN-17163]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17164 RXN-17164]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8813 RXN-8813]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-4751}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28679 28679]
+
{{#set: common name=stellatic acid biosynthesis}}
−
* UNIPROT:
+
{{#set: reaction found=3}}
−
** [http://www.uniprot.org/uniprot/P17993 P17993]
+
{{#set: total reaction=8}}
−
** [http://www.uniprot.org/uniprot/Q9JWE6 Q9JWE6]
+
{{#set: completion rate=38.0}}
−
** [http://www.uniprot.org/uniprot/Q9ZCT9 Q9ZCT9]
+
−
** [http://www.uniprot.org/uniprot/P37431 P37431]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=3-demethylubiquinone-9_3-methyltransferase}}
+
−
{{#set: ec number=EC-2.1.1.64}}
+
−
{{#set: common name=5-demethylubiquinone-8 methyltransferase}}
+
−
{{#set: gene associated=Tiso_gene_6943}}
+
−
{{#set: in pathway=PWY-6708|PWY-5870}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 16:01, 21 March 2018

Pathway PWY-7736

  • taxonomic range:
  • common name:
    • stellatic acid biosynthesis
  • Synonym(s):

Reaction(s) found

3 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-7419&oldid=31915"